Top 10 genes with highest correlation to Rv2738c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0399c/lpqK | (cc=0.6205) | info on Rv0399c/lpqK |
| Rv3919c/gid | (cc=0.5884) | info on Rv3919c/gid |
| Rv2650c/- | (cc=0.5845) | info on Rv2650c/- |
| Rv1678/- | (cc=0.5484) | info on Rv1678/- |
| Rv0160c/PE4 | (cc=0.5353) | info on Rv0160c/PE4 |
| Rv3572/- | (cc=0.5225) | info on Rv3572/- |
| Rv0940c/- | (cc=0.5083) | info on Rv0940c/- |
| Rv3191c/- | (cc=0.4943) | info on Rv3191c/- |
| Rv0968/- | (cc=0.4931) | info on Rv0968/- |
| Rv3291c/lrpA | (cc=0.4894) | info on Rv3291c/lrpA |
Correlation of Rv2738c/- with Rv3291c/lrpA
Normalized LFCs for Rv2738c/-:
(description and provenance of datasets)
| Rv2738c/- | Rv3291c/lrpA | |
| Fe_supp_jason_reseq | -0.415 | -0.578 |
| low_pH_jason_reseq | 1.104 | 2.029 |
| NO_jason_reseq | -1.013 | -0.601 |
| B6_jason_reseq | -1.973 | -0.222 |
| MHCII_jason_reseq | -1.598 | -0.252 |
| Isoniazid02 | -4.829 | -2.93 |
| Rifampicin4 | 0.904 | 0.349 |
| Ethambutol3 | -3.412 | -2.265 |
| Meropenem3 | -3.54 | -2.83 |
| Vancomycin16 | -1.417 | -0.844 |
| Rv2680_day32 | -1.982 | -1.684 |
| H37Rv_KO_MarP | 0.579 | -0.327 |
| hypoxia_3wks | -1.388 | 0.0 |
| hypoxia_6wks | -0.704 | 1.186 |
| glycerol | 1.011 | -1.232 |
| cholesterol | 0.041 | -0.36 |
| AJ | -0.632 | -0.145 |
| Bibs02 | 0.366 | 0.54 |
| Bibs02c | 0.826 | 0.2 |
| BL6 | -1.448 | 0.98 |
| BL6a | 0.647 | 0.702 |
| BXD01 | -0.064 | 0.461 |
| BXD010 | 0.445 | 1.512 |
| BXD011 | -0.063 | 1.021 |
| BXD03 | 0.92 | 0.626 |
| BXD04 | 0.058 | 0.752 |
| BXD05 | 0.955 | 0.863 |
| BXD06 | 0.235 | 0.967 |
| BXD07 | 0.432 | 0.641 |
| BXD08 | 0.851 | 0.509 |
| BXD09 | 0.013 | 0.789 |
| CAST | -1.875 | 0.344 |
| CCcont | -1.564 | 0.058 |
| DS01 | -0.89 | -0.412 |
| DS02 | 0.274 | -0.044 |
| DS04 | 1.116 | 0.687 |
| DS0c | -1.353 | 0.324 |
| GP01 | -0.109 | -0.756 |
| GP02 | -0.894 | -0.972 |
| GP0c | 0.107 | -0.29 |
| NOD | 0.571 | -0.14 |
| NZO | -0.139 | -0.211 |
| PWK | -0.997 | 0.152 |
| H37Rv_KO_CtpC | 1.283 | -0.067 |
| H37Rv_KO_CtpD | 0.387 | 1.14 |
| H37Rv_KO_Rv1272 | 0.226 | 0.52 |
| H37Rv_KO_SugABC | -1.147 | 2.654 |
| H37Rv_KO_MbtN | 0.393 | 1.817 |
| Trans05 | 1.008 | 0.406 |
| macrophage_unactivated | -0.657 | -0.271 |
| IL1 | -0.267 | -0.525 |
| Rapamycin | 0.298 | -0.543 |
| Tcell | 0.456 | -0.837 |
| GMCSF | -1.048 | -0.858 |
| IFNab | -0.103 | -0.68 |
| IFNg | 0.406 | -0.823 |
| IFNg_GMCSF1 | -0.129 | -0.223 |
| Rv1432_day32 | 0.096 | -0.239 |
| Rv1565c_day32 | -0.76 | 0.251 |
| secA2_input | 0.387 | 0.421 |
| delta_Rv3594 | 0.277 | -0.746 |
| delta_Rv3717 | 0.147 | -1.711 |
| delta_Rv3811 | 0.891 | -0.815 |
| delta_Rv0954 | 0.0 | 0.171 |
| PonA1 | 0.19 | -0.167 |
| EccD1_KO | 0.576 | 0.793 |
| EspI_KO | 0.063 | 0.662 |
| PE35_KO | -1.138 | 1.304 |
| PPE68_KO | -0.243 | 0.71 |
| glycerol2 | -0.958 | -0.911 |
| lignocerate | -0.401 | -0.161 |
| oleate | -1.46 | 0.308 |
| phosphatidylcholine | -0.287 | -0.328 |
| acetate | 0.048 | 0.487 |
| glucAc | -0.127 | -0.614 |
| Rv0950ko | 0.917 | 0.633 |
| Rv1096ko | -0.051 | 1.236 |
| Rv3684ko | 0.688 | 0.809 |
| delta_otsA_trehalose | 0.382 | 0.274 |