Top 10 genes with highest correlation to Rv2731/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0929/pstC2 | (cc=0.6454) | info on Rv0929/pstC2 |
| Rv0928/pstS3 | (cc=0.6412) | info on Rv0928/pstS3 |
| Rv0820/phoT | (cc=0.6312) | info on Rv0820/phoT |
| Rv3050c/- | (cc=0.604) | info on Rv3050c/- |
| Rv0930/pstA1 | (cc=0.6039) | info on Rv0930/pstA1 |
| Rv2372c/- | (cc=0.5933) | info on Rv2372c/- |
| Rv0924c/mntH | (cc=0.5848) | info on Rv0924c/mntH |
| Rv1925/fadD31 | (cc=0.5572) | info on Rv1925/fadD31 |
| Rv3842c/glpQ1 | (cc=0.5471) | info on Rv3842c/glpQ1 |
| Rv3823c/mmpL8 | (cc=0.5453) | info on Rv3823c/mmpL8 |
Correlation of Rv2731/- with Rv3842c/glpQ1
Normalized LFCs for Rv2731/-:
(description and provenance of datasets)
| Rv2731/- | Rv3842c/glpQ1 | |
| Fe_supp_jason_reseq | -2.379 | -2.242 |
| low_pH_jason_reseq | -0.194 | 0.574 |
| NO_jason_reseq | 0.066 | 3.631 |
| B6_jason_reseq | 0.758 | 1.38 |
| MHCII_jason_reseq | -1.473 | -0.853 |
| Isoniazid02 | 1.493 | 0.288 |
| Rifampicin4 | -1.14 | -0.33 |
| Ethambutol3 | 0.062 | 2.837 |
| Meropenem3 | -0.108 | -0.259 |
| Vancomycin16 | -0.764 | 0.146 |
| Rv2680_day32 | 2.646 | 1.647 |
| H37Rv_KO_MarP | 0.384 | -1.617 |
| hypoxia_3wks | -0.351 | -1.519 |
| hypoxia_6wks | -0.952 | 1.675 |
| glycerol | 1.807 | 0.016 |
| cholesterol | 1.207 | -0.252 |
| AJ | -1.104 | 0.528 |
| Bibs02 | 0.91 | -0.551 |
| Bibs02c | -0.255 | -1.51 |
| BL6 | 1.916 | 1.67 |
| BL6a | 1.291 | 2.716 |
| BXD01 | 1.932 | 3.451 |
| BXD010 | 1.92 | 2.506 |
| BXD011 | 1.774 | 4.887 |
| BXD03 | 0.068 | 1.946 |
| BXD04 | 1.641 | 3.768 |
| BXD05 | 0.083 | 2.897 |
| BXD06 | 1.331 | 3.915 |
| BXD07 | 2.091 | 3.764 |
| BXD08 | 2.942 | 3.535 |
| BXD09 | 1.316 | 3.421 |
| CAST | 0.686 | 1.655 |
| CCcont | 1.304 | -0.279 |
| DS01 | -0.69 | -2.566 |
| DS02 | 0.709 | -3.052 |
| DS04 | 0.614 | -0.749 |
| DS0c | 1.975 | -1.941 |
| GP01 | 1.64 | 3.019 |
| GP02 | 2.305 | 2.711 |
| GP0c | 2.616 | 3.642 |
| NOD | -1.461 | 0.085 |
| NZO | 0.828 | 1.361 |
| PWK | 0.0 | 3.319 |
| H37Rv_KO_CtpC | 1.418 | -0.514 |
| H37Rv_KO_CtpD | 0.208 | 0.058 |
| H37Rv_KO_Rv1272 | 0.985 | 0.94 |
| H37Rv_KO_SugABC | -0.911 | 1.215 |
| H37Rv_KO_MbtN | 1.979 | 2.418 |
| Trans05 | 2.191 | 1.7 |
| macrophage_unactivated | -1.61 | -3.043 |
| IL1 | -0.43 | 0.409 |
| Rapamycin | -0.528 | -0.497 |
| Tcell | 0.332 | 0.378 |
| GMCSF | -1.938 | -2.764 |
| IFNab | -0.493 | -0.327 |
| IFNg | -0.535 | -1.139 |
| IFNg_GMCSF1 | 0.126 | -1.339 |
| Rv1432_day32 | 1.802 | 3.437 |
| Rv1565c_day32 | -0.602 | -3.047 |
| secA2_input | 0.454 | 0.528 |
| delta_Rv3594 | 0.093 | 0.229 |
| delta_Rv3717 | 2.139 | 2.504 |
| delta_Rv3811 | 0.534 | 1.028 |
| delta_Rv0954 | -0.105 | -2.01 |
| PonA1 | -0.553 | -2.098 |
| EccD1_KO | 0.428 | -1.687 |
| EspI_KO | -0.2 | -1.928 |
| PE35_KO | -0.551 | -2.091 |
| PPE68_KO | 0.573 | -2.278 |
| glycerol2 | -0.383 | 0.205 |
| lignocerate | -2.325 | -1.063 |
| oleate | -1.007 | -0.284 |
| phosphatidylcholine | -2.844 | -0.633 |
| acetate | -0.07 | -0.372 |
| glucAc | 0.622 | -0.425 |
| Rv0950ko | 1.83 | -1.08 |
| Rv1096ko | 0.962 | -0.935 |
| Rv3684ko | 1.634 | 0.521 |
| delta_otsA_trehalose | -1.881 | 0.282 |