Top 10 genes with highest correlation to Rv2679/echA15:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0342/iniA | (cc=0.6294) | info on Rv0342/iniA |
| Rv3406/- | (cc=0.5782) | info on Rv3406/- |
| Rv2577/- | (cc=0.5777) | info on Rv2577/- |
| Rv3077/- | (cc=0.559) | info on Rv3077/- |
| Rv0968/- | (cc=0.5541) | info on Rv0968/- |
| Rv3323c/moaX | (cc=0.5225) | info on Rv3323c/moaX |
| Rv1726/- | (cc=0.5212) | info on Rv1726/- |
| Rv3329/- | (cc=0.5175) | info on Rv3329/- |
| Rv0160c/PE4 | (cc=0.5145) | info on Rv0160c/PE4 |
| Rv3435c/- | (cc=0.5112) | info on Rv3435c/- |
Correlation of Rv2679/echA15 with Rv3077/-
Normalized LFCs for Rv2679/echA15:
(description and provenance of datasets)
| Rv2679/echA15 | Rv3077/- | |
| Fe_supp_jason_reseq | -0.857 | -0.412 |
| low_pH_jason_reseq | -1.198 | -0.453 |
| NO_jason_reseq | 1.142 | -0.087 |
| B6_jason_reseq | -0.225 | 0.009 |
| MHCII_jason_reseq | 0.652 | 0.317 |
| Isoniazid02 | -2.239 | -1.193 |
| Rifampicin4 | 0.214 | 0.693 |
| Ethambutol3 | -1.268 | -0.541 |
| Meropenem3 | -1.438 | -0.452 |
| Vancomycin16 | -0.873 | -0.475 |
| Rv2680_day32 | 0.16 | -0.234 |
| H37Rv_KO_MarP | 0.085 | 0.301 |
| hypoxia_3wks | -0.319 | -0.574 |
| hypoxia_6wks | -0.66 | -0.651 |
| glycerol | 0.48 | -0.374 |
| cholesterol | 0.102 | -0.276 |
| AJ | 0.388 | -0.43 |
| Bibs02 | -0.71 | -0.101 |
| Bibs02c | 0.1 | 0.239 |
| BL6 | 0.269 | 0.138 |
| BL6a | -0.696 | -0.274 |
| BXD01 | 0.183 | -0.493 |
| BXD010 | -0.586 | -0.315 |
| BXD011 | 0.013 | -0.064 |
| BXD03 | -0.669 | 0.093 |
| BXD04 | -0.318 | 0.116 |
| BXD05 | -0.124 | -0.106 |
| BXD06 | -0.331 | -0.233 |
| BXD07 | 0.032 | -0.264 |
| BXD08 | 0.514 | -0.253 |
| BXD09 | -0.61 | -0.461 |
| CAST | -0.445 | -0.307 |
| CCcont | 0.019 | -0.367 |
| DS01 | -0.12 | 0.092 |
| DS02 | -0.347 | 0.076 |
| DS04 | 0.201 | 0.564 |
| DS0c | -0.925 | -0.03 |
| GP01 | 0.265 | -0.36 |
| GP02 | 1.004 | 0.753 |
| GP0c | 0.0 | -0.206 |
| NOD | 0.41 | -0.103 |
| NZO | 0.202 | 0.244 |
| PWK | 0.32 | -0.352 |
| H37Rv_KO_CtpC | 0.118 | -0.985 |
| H37Rv_KO_CtpD | 1.037 | 0.41 |
| H37Rv_KO_Rv1272 | -0.179 | 0.0 |
| H37Rv_KO_SugABC | -0.594 | -0.142 |
| H37Rv_KO_MbtN | 0.237 | -0.684 |
| Trans05 | -0.359 | 0.269 |
| macrophage_unactivated | -0.994 | -0.306 |
| IL1 | 0.329 | 0.086 |
| Rapamycin | 0.377 | 0.043 |
| Tcell | -0.267 | -0.472 |
| GMCSF | 0.692 | -0.116 |
| IFNab | 0.054 | -0.248 |
| IFNg | -0.168 | -0.198 |
| IFNg_GMCSF1 | 0.258 | 0.415 |
| Rv1432_day32 | 0.096 | -0.156 |
| Rv1565c_day32 | -0.321 | 0.167 |
| secA2_input | 0.603 | 0.496 |
| delta_Rv3594 | -0.387 | -0.515 |
| delta_Rv3717 | 0.248 | -0.595 |
| delta_Rv3811 | -1.472 | -0.454 |
| delta_Rv0954 | -0.076 | 0.315 |
| PonA1 | -0.062 | 0.307 |
| EccD1_KO | -0.454 | -0.178 |
| EspI_KO | 0.157 | 0.22 |
| PE35_KO | -0.362 | -0.403 |
| PPE68_KO | 0.118 | -0.291 |
| glycerol2 | 0.387 | -0.025 |
| lignocerate | 0.716 | 0.656 |
| oleate | 0.795 | -0.376 |
| phosphatidylcholine | 0.794 | 0.259 |
| acetate | 0.073 | -0.138 |
| glucAc | 0.036 | 0.354 |
| Rv0950ko | 0.627 | 0.386 |
| Rv1096ko | 0.609 | 0.965 |
| Rv3684ko | 0.544 | 0.714 |
| delta_otsA_trehalose | 1.186 | 1.489 |