Top 10 genes with highest correlation to Rv2670c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0470A/- | (cc=0.6088) | info on Rv0470A/- |
| Rv2646/- | (cc=0.5715) | info on Rv2646/- |
| Rv0435c/- | (cc=0.5599) | info on Rv0435c/- |
| Rv0418/lpqL | (cc=0.5356) | info on Rv0418/lpqL |
| Rv3319/sdhB | (cc=0.5232) | info on Rv3319/sdhB |
| Rv1775/- | (cc=0.5155) | info on Rv1775/- |
| Rv0229c/- | (cc=0.5) | info on Rv0229c/- |
| Rv2725c/hflX | (cc=0.4999) | info on Rv2725c/hflX |
| Rv3401/- | (cc=0.4851) | info on Rv3401/- |
| Rv3062/ligB | (cc=0.4833) | info on Rv3062/ligB |
Correlation of Rv2670c/- with Rv3319/sdhB
Normalized LFCs for Rv2670c/-:
(description and provenance of datasets)
| Rv2670c/- | Rv3319/sdhB | |
| Fe_supp_jason_reseq | 0.219 | 0.0 |
| low_pH_jason_reseq | 0.393 | -0.299 |
| NO_jason_reseq | 0.452 | 4.542 |
| B6_jason_reseq | 1.09 | 0.128 |
| MHCII_jason_reseq | 0.724 | 0.177 |
| Isoniazid02 | -0.019 | 0.761 |
| Rifampicin4 | -0.035 | 0.317 |
| Ethambutol3 | -0.479 | 0.565 |
| Meropenem3 | 2.538 | 2.176 |
| Vancomycin16 | 0.231 | 0.777 |
| Rv2680_day32 | -0.138 | -0.462 |
| H37Rv_KO_MarP | -0.109 | -0.148 |
| hypoxia_3wks | 0.518 | 0.427 |
| hypoxia_6wks | 0.428 | 0.349 |
| glycerol | 1.153 | 1.217 |
| cholesterol | 0.535 | 0.477 |
| AJ | -1.403 | -1.166 |
| Bibs02 | 0.152 | -1.951 |
| Bibs02c | 0.591 | -1.314 |
| BL6 | 0.123 | -1.009 |
| BL6a | -0.016 | -2.274 |
| BXD01 | -0.964 | -2.483 |
| BXD010 | -0.455 | -1.732 |
| BXD011 | -0.77 | -1.646 |
| BXD03 | 0.209 | -2.321 |
| BXD04 | -0.524 | -2.447 |
| BXD05 | -0.913 | -0.804 |
| BXD06 | -1.327 | -2.371 |
| BXD07 | -1.141 | -1.873 |
| BXD08 | -0.564 | -1.19 |
| BXD09 | -0.85 | -1.989 |
| CAST | -0.484 | -1.096 |
| CCcont | -0.669 | -0.658 |
| DS01 | 0.963 | -1.23 |
| DS02 | 0.199 | 0.243 |
| DS04 | 0.628 | -0.476 |
| DS0c | 0.335 | 0.688 |
| GP01 | -0.763 | -1.724 |
| GP02 | -0.577 | -2.314 |
| GP0c | -1.142 | -2.727 |
| NOD | 0.792 | -0.617 |
| NZO | 0.387 | -1.468 |
| PWK | -0.786 | -1.807 |
| H37Rv_KO_CtpC | 0.16 | -1.391 |
| H37Rv_KO_CtpD | 0.087 | -2.952 |
| H37Rv_KO_Rv1272 | -0.795 | -1.44 |
| H37Rv_KO_SugABC | -0.408 | -1.261 |
| H37Rv_KO_MbtN | -1.003 | -2.12 |
| Trans05 | -0.261 | 0.266 |
| macrophage_unactivated | -0.413 | -0.17 |
| IL1 | 0.27 | 1.557 |
| Rapamycin | 0.049 | 2.335 |
| Tcell | -0.104 | 1.945 |
| GMCSF | -0.486 | 0.52 |
| IFNab | -0.665 | 0.106 |
| IFNg | 0.163 | 0.486 |
| IFNg_GMCSF1 | 0.685 | 1.122 |
| Rv1432_day32 | -0.031 | -1.459 |
| Rv1565c_day32 | -0.565 | -2.772 |
| secA2_input | 0.338 | 0.258 |
| delta_Rv3594 | -0.266 | -0.255 |
| delta_Rv3717 | -0.756 | -1.258 |
| delta_Rv3811 | -0.97 | -0.211 |
| delta_Rv0954 | 0.466 | 1.821 |
| PonA1 | -0.201 | -0.379 |
| EccD1_KO | 0.204 | 1.171 |
| EspI_KO | -0.428 | 1.577 |
| PE35_KO | 0.356 | 1.251 |
| PPE68_KO | 0.246 | 1.187 |
| glycerol2 | -0.384 | -0.764 |
| lignocerate | -0.462 | -0.606 |
| oleate | -0.342 | -1.852 |
| phosphatidylcholine | -0.141 | -0.731 |
| acetate | -0.168 | -0.347 |
| glucAc | -0.508 | 0.483 |
| Rv0950ko | 0.727 | 1.067 |
| Rv1096ko | 1.3 | 1.019 |
| Rv3684ko | 0.91 | 0.616 |
| delta_otsA_trehalose | -0.368 | 1.212 |