Top 10 genes with highest correlation to Rv2670c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0470A/- | (cc=0.6088) | info on Rv0470A/- |
| Rv2646/- | (cc=0.5715) | info on Rv2646/- |
| Rv0435c/- | (cc=0.5599) | info on Rv0435c/- |
| Rv0418/lpqL | (cc=0.5356) | info on Rv0418/lpqL |
| Rv3319/sdhB | (cc=0.5232) | info on Rv3319/sdhB |
| Rv1775/- | (cc=0.5155) | info on Rv1775/- |
| Rv0229c/- | (cc=0.5) | info on Rv0229c/- |
| Rv2725c/hflX | (cc=0.4999) | info on Rv2725c/hflX |
| Rv3401/- | (cc=0.4851) | info on Rv3401/- |
| Rv3062/ligB | (cc=0.4833) | info on Rv3062/ligB |
Correlation of Rv2670c/- with Rv0470A/-
Normalized LFCs for Rv2670c/-:
(description and provenance of datasets)
| Rv2670c/- | Rv0470A/- | |
| Fe_supp_jason_reseq | 0.219 | -0.748 |
| low_pH_jason_reseq | 0.393 | -0.236 |
| NO_jason_reseq | 0.452 | -0.139 |
| B6_jason_reseq | 1.09 | 0.027 |
| MHCII_jason_reseq | 0.724 | 0.075 |
| Isoniazid02 | -0.019 | 1.019 |
| Rifampicin4 | -0.035 | 0.571 |
| Ethambutol3 | -0.479 | 0.776 |
| Meropenem3 | 2.538 | 1.85 |
| Vancomycin16 | 0.231 | 0.716 |
| Rv2680_day32 | -0.138 | -0.505 |
| H37Rv_KO_MarP | -0.109 | 0.686 |
| hypoxia_3wks | 0.518 | -0.415 |
| hypoxia_6wks | 0.428 | -1.401 |
| glycerol | 1.153 | -0.009 |
| cholesterol | 0.535 | -0.15 |
| AJ | -1.403 | -0.812 |
| Bibs02 | 0.152 | -0.099 |
| Bibs02c | 0.591 | 0.362 |
| BL6 | 0.123 | -1.052 |
| BL6a | -0.016 | -0.492 |
| BXD01 | -0.964 | -1.861 |
| BXD010 | -0.455 | -1.26 |
| BXD011 | -0.77 | -1.343 |
| BXD03 | 0.209 | -1.932 |
| BXD04 | -0.524 | -1.959 |
| BXD05 | -0.913 | -1.381 |
| BXD06 | -1.327 | -1.533 |
| BXD07 | -1.141 | -1.565 |
| BXD08 | -0.564 | -1.577 |
| BXD09 | -0.85 | -2.007 |
| CAST | -0.484 | 0.065 |
| CCcont | -0.669 | -0.641 |
| DS01 | 0.963 | 0.71 |
| DS02 | 0.199 | 0.714 |
| DS04 | 0.628 | 0.96 |
| DS0c | 0.335 | 0.658 |
| GP01 | -0.763 | -1.03 |
| GP02 | -0.577 | -0.776 |
| GP0c | -1.142 | -1.118 |
| NOD | 0.792 | 0.073 |
| NZO | 0.387 | -0.341 |
| PWK | -0.786 | -0.428 |
| H37Rv_KO_CtpC | 0.16 | -0.818 |
| H37Rv_KO_CtpD | 0.087 | 0.323 |
| H37Rv_KO_Rv1272 | -0.795 | -0.706 |
| H37Rv_KO_SugABC | -0.408 | -0.798 |
| H37Rv_KO_MbtN | -1.003 | -1.506 |
| Trans05 | -0.261 | -0.854 |
| macrophage_unactivated | -0.413 | -0.66 |
| IL1 | 0.27 | -0.46 |
| Rapamycin | 0.049 | -0.411 |
| Tcell | -0.104 | -0.593 |
| GMCSF | -0.486 | -0.232 |
| IFNab | -0.665 | -0.565 |
| IFNg | 0.163 | -0.802 |
| IFNg_GMCSF1 | 0.685 | -0.277 |
| Rv1432_day32 | -0.031 | -1.448 |
| Rv1565c_day32 | -0.565 | -0.329 |
| secA2_input | 0.338 | 0.534 |
| delta_Rv3594 | -0.266 | -1.834 |
| delta_Rv3717 | -0.756 | -1.651 |
| delta_Rv3811 | -0.97 | -1.517 |
| delta_Rv0954 | 0.466 | -0.099 |
| PonA1 | -0.201 | -0.293 |
| EccD1_KO | 0.204 | -0.753 |
| EspI_KO | -0.428 | -0.742 |
| PE35_KO | 0.356 | -0.633 |
| PPE68_KO | 0.246 | -0.909 |
| glycerol2 | -0.384 | 0.611 |
| lignocerate | -0.462 | 0.497 |
| oleate | -0.342 | 0.214 |
| phosphatidylcholine | -0.141 | 0.336 |
| acetate | -0.168 | -0.04 |
| glucAc | -0.508 | -0.321 |
| Rv0950ko | 0.727 | 1.113 |
| Rv1096ko | 1.3 | 0.893 |
| Rv3684ko | 0.91 | 0.678 |
| delta_otsA_trehalose | -0.368 | 0.027 |