Top 10 genes with highest correlation to Rv2668/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2287/yjcE | (cc=0.7529) | info on Rv2287/yjcE |
| Rv0293c/- | (cc=0.6817) | info on Rv0293c/- |
| Rv1913/- | (cc=0.6815) | info on Rv1913/- |
| Rv3749c/- | (cc=0.6646) | info on Rv3749c/- |
| Rv1356c/- | (cc=0.6192) | info on Rv1356c/- |
| Rv0187/- | (cc=0.6031) | info on Rv0187/- |
| Rv2506/- | (cc=0.5681) | info on Rv2506/- |
| Rv1472/echA12 | (cc=0.5452) | info on Rv1472/echA12 |
| Rv2637/dedA | (cc=0.539) | info on Rv2637/dedA |
| Rv0182c/sigG | (cc=0.5336) | info on Rv0182c/sigG |
Correlation of Rv2668/- with Rv1913/-
Normalized LFCs for Rv2668/-:
(description and provenance of datasets)
| Rv2668/- | Rv1913/- | |
| Fe_supp_jason_reseq | -1.182 | 1.913 |
| low_pH_jason_reseq | -0.391 | 0.952 |
| NO_jason_reseq | 0.076 | 0.583 |
| B6_jason_reseq | -0.461 | -0.571 |
| MHCII_jason_reseq | -1.006 | 0.457 |
| Isoniazid02 | 0.349 | -0.116 |
| Rifampicin4 | 0.804 | 0.203 |
| Ethambutol3 | 0.773 | 0.035 |
| Meropenem3 | -0.295 | -0.236 |
| Vancomycin16 | 0.788 | -0.212 |
| Rv2680_day32 | -1.115 | 0.985 |
| H37Rv_KO_MarP | 0.127 | -0.797 |
| hypoxia_3wks | -0.231 | 0.327 |
| hypoxia_6wks | -0.428 | 2.543 |
| glycerol | 1.096 | -0.629 |
| cholesterol | -1.433 | -1.144 |
| AJ | 0.182 | -0.876 |
| Bibs02 | -0.119 | -2.188 |
| Bibs02c | -1.234 | -1.725 |
| BL6 | 0.61 | 0.896 |
| BL6a | -0.11 | -0.032 |
| BXD01 | -0.44 | 1.136 |
| BXD010 | -0.62 | -0.455 |
| BXD011 | 0.141 | 2.06 |
| BXD03 | 0.193 | 0.374 |
| BXD04 | -0.057 | 0.216 |
| BXD05 | 0.57 | 0.68 |
| BXD06 | -0.087 | 1.098 |
| BXD07 | -0.103 | 0.752 |
| BXD08 | 0.221 | -0.414 |
| BXD09 | 0.074 | 0.815 |
| CAST | -1.587 | 0.464 |
| CCcont | 0.77 | 0.694 |
| DS01 | -1.11 | -0.406 |
| DS02 | 0.882 | -0.217 |
| DS04 | 0.135 | 0.204 |
| DS0c | -0.336 | -0.585 |
| GP01 | -2.044 | 0.499 |
| GP02 | -1.017 | 0.468 |
| GP0c | -0.767 | -0.432 |
| NOD | -0.703 | -1.175 |
| NZO | -1.445 | -1.383 |
| PWK | -0.787 | -0.23 |
| H37Rv_KO_CtpC | -0.548 | 0.805 |
| H37Rv_KO_CtpD | -2.086 | -0.316 |
| H37Rv_KO_Rv1272 | -0.234 | 2.984 |
| H37Rv_KO_SugABC | -1.183 | 2.071 |
| H37Rv_KO_MbtN | -0.675 | 0.56 |
| Trans05 | -0.834 | 1.699 |
| macrophage_unactivated | -0.129 | -0.802 |
| IL1 | -1.498 | -6.0 |
| Rapamycin | -3.069 | -6.0 |
| Tcell | 3.982 | 4.027 |
| GMCSF | -4.399 | -6.0 |
| IFNab | -4.577 | -6.0 |
| IFNg | -4.22 | -6.0 |
| IFNg_GMCSF1 | -5.442 | -6.0 |
| Rv1432_day32 | -1.156 | -0.897 |
| Rv1565c_day32 | -1.93 | 0.28 |
| secA2_input | 0.64 | -0.848 |
| delta_Rv3594 | -0.572 | 0.217 |
| delta_Rv3717 | -1.062 | 0.836 |
| delta_Rv3811 | -0.242 | -0.125 |
| delta_Rv0954 | 0.213 | -0.501 |
| PonA1 | -0.357 | -0.291 |
| EccD1_KO | 1.036 | -0.872 |
| EspI_KO | 0.034 | -1.366 |
| PE35_KO | -0.607 | -0.893 |
| PPE68_KO | -0.49 | -0.979 |
| glycerol2 | -1.093 | 0.963 |
| lignocerate | 0.6 | 1.388 |
| oleate | -1.038 | -0.22 |
| phosphatidylcholine | -0.101 | 1.004 |
| acetate | 0.464 | 1.142 |
| glucAc | 0.571 | 1.034 |
| Rv0950ko | -0.305 | 0.715 |
| Rv1096ko | 1.641 | -0.407 |
| Rv3684ko | 0.599 | 0.36 |
| delta_otsA_trehalose | 0.815 | 1.073 |