Top 10 genes with highest correlation to Rv2668/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2287/yjcE | (cc=0.7529) | info on Rv2287/yjcE |
| Rv0293c/- | (cc=0.6817) | info on Rv0293c/- |
| Rv1913/- | (cc=0.6815) | info on Rv1913/- |
| Rv3749c/- | (cc=0.6646) | info on Rv3749c/- |
| Rv1356c/- | (cc=0.6192) | info on Rv1356c/- |
| Rv0187/- | (cc=0.6031) | info on Rv0187/- |
| Rv2506/- | (cc=0.5681) | info on Rv2506/- |
| Rv1472/echA12 | (cc=0.5452) | info on Rv1472/echA12 |
| Rv2637/dedA | (cc=0.539) | info on Rv2637/dedA |
| Rv0182c/sigG | (cc=0.5336) | info on Rv0182c/sigG |
Correlation of Rv2668/- with Rv0187/-
Normalized LFCs for Rv2668/-:
(description and provenance of datasets)
| Rv2668/- | Rv0187/- | |
| Fe_supp_jason_reseq | -1.182 | -1.197 |
| low_pH_jason_reseq | -0.391 | 0.293 |
| NO_jason_reseq | 0.076 | -0.341 |
| B6_jason_reseq | -0.461 | 1.04 |
| MHCII_jason_reseq | -1.006 | 0.299 |
| Isoniazid02 | 0.349 | -1.219 |
| Rifampicin4 | 0.804 | -0.29 |
| Ethambutol3 | 0.773 | 1.153 |
| Meropenem3 | -0.295 | -0.701 |
| Vancomycin16 | 0.788 | -0.382 |
| Rv2680_day32 | -1.115 | 1.972 |
| H37Rv_KO_MarP | 0.127 | 0.776 |
| hypoxia_3wks | -0.231 | -0.534 |
| hypoxia_6wks | -0.428 | 0.257 |
| glycerol | 1.096 | -0.157 |
| cholesterol | -1.433 | 0.323 |
| AJ | 0.182 | -0.659 |
| Bibs02 | -0.119 | -0.376 |
| Bibs02c | -1.234 | -1.852 |
| BL6 | 0.61 | 0.64 |
| BL6a | -0.11 | -0.408 |
| BXD01 | -0.44 | 0.761 |
| BXD010 | -0.62 | 0.975 |
| BXD011 | 0.141 | 0.121 |
| BXD03 | 0.193 | -1.048 |
| BXD04 | -0.057 | 0.911 |
| BXD05 | 0.57 | 0.246 |
| BXD06 | -0.087 | -0.358 |
| BXD07 | -0.103 | 0.337 |
| BXD08 | 0.221 | 0.27 |
| BXD09 | 0.074 | 0.536 |
| CAST | -1.587 | 0.42 |
| CCcont | 0.77 | 0.729 |
| DS01 | -1.11 | 0.861 |
| DS02 | 0.882 | 0.131 |
| DS04 | 0.135 | -0.583 |
| DS0c | -0.336 | 2.544 |
| GP01 | -2.044 | -1.533 |
| GP02 | -1.017 | -0.417 |
| GP0c | -0.767 | -0.527 |
| NOD | -0.703 | 0.028 |
| NZO | -1.445 | 0.234 |
| PWK | -0.787 | 0.209 |
| H37Rv_KO_CtpC | -0.548 | 0.0 |
| H37Rv_KO_CtpD | -2.086 | 0.949 |
| H37Rv_KO_Rv1272 | -0.234 | 0.371 |
| H37Rv_KO_SugABC | -1.183 | -1.654 |
| H37Rv_KO_MbtN | -0.675 | -0.31 |
| Trans05 | -0.834 | -0.459 |
| macrophage_unactivated | -0.129 | -1.793 |
| IL1 | -1.498 | -1.646 |
| Rapamycin | -3.069 | -3.839 |
| Tcell | 3.982 | 1.388 |
| GMCSF | -4.399 | -3.25 |
| IFNab | -4.577 | -2.201 |
| IFNg | -4.22 | -3.4 |
| IFNg_GMCSF1 | -5.442 | -1.668 |
| Rv1432_day32 | -1.156 | 0.477 |
| Rv1565c_day32 | -1.93 | -2.147 |
| secA2_input | 0.64 | 0.989 |
| delta_Rv3594 | -0.572 | -0.197 |
| delta_Rv3717 | -1.062 | -0.232 |
| delta_Rv3811 | -0.242 | -0.074 |
| delta_Rv0954 | 0.213 | 0.572 |
| PonA1 | -0.357 | -0.532 |
| EccD1_KO | 1.036 | -0.332 |
| EspI_KO | 0.034 | -0.125 |
| PE35_KO | -0.607 | -0.761 |
| PPE68_KO | -0.49 | -0.214 |
| glycerol2 | -1.093 | 0.458 |
| lignocerate | 0.6 | 0.575 |
| oleate | -1.038 | 0.337 |
| phosphatidylcholine | -0.101 | 0.381 |
| acetate | 0.464 | 0.337 |
| glucAc | 0.571 | 1.47 |
| Rv0950ko | -0.305 | 0.501 |
| Rv1096ko | 1.641 | 1.034 |
| Rv3684ko | 0.599 | 1.837 |
| delta_otsA_trehalose | 0.815 | 0.527 |