Top 10 genes with highest correlation to Rv2660c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0601c/- | (cc=0.6105) | info on Rv0601c/- |
| Rv0318c/- | (cc=0.542) | info on Rv0318c/- |
| Rv2532c/- | (cc=0.5241) | info on Rv2532c/- |
| Rv0319/pcp | (cc=0.5009) | info on Rv0319/pcp |
| Rv0789c/- | (cc=0.4955) | info on Rv0789c/- |
| Rv1162/narH | (cc=0.4696) | info on Rv1162/narH |
| Rv2919c/glnB | (cc=0.4636) | info on Rv2919c/glnB |
| Rv2802c/- | (cc=0.4483) | info on Rv2802c/- |
| Rv3534c/hsaF | (cc=0.4433) | info on Rv3534c/hsaF |
| Rv2813/- | (cc=0.4366) | info on Rv2813/- |
Correlation of Rv2660c/- with Rv1162/narH
Normalized LFCs for Rv2660c/-:
(description and provenance of datasets)
| Rv2660c/- | Rv1162/narH | |
| Fe_supp_jason_reseq | 0.349 | 0.009 |
| low_pH_jason_reseq | 0.815 | -0.644 |
| NO_jason_reseq | 0.725 | -0.029 |
| B6_jason_reseq | 0.689 | -0.557 |
| MHCII_jason_reseq | 1.056 | 0.198 |
| Isoniazid02 | 0.631 | 0.0 |
| Rifampicin4 | 0.157 | 0.125 |
| Ethambutol3 | -0.36 | 0.624 |
| Meropenem3 | 0.707 | 0.812 |
| Vancomycin16 | 1.295 | 0.143 |
| Rv2680_day32 | 0.054 | -0.231 |
| H37Rv_KO_MarP | 0.539 | 0.622 |
| hypoxia_3wks | -0.845 | -0.024 |
| hypoxia_6wks | -1.848 | -0.138 |
| glycerol | -0.434 | -0.315 |
| cholesterol | 0.064 | -0.267 |
| AJ | 0.123 | 0.56 |
| Bibs02 | 0.842 | -0.452 |
| Bibs02c | 0.664 | 0.346 |
| BL6 | -1.031 | 0.013 |
| BL6a | -0.298 | 0.604 |
| BXD01 | -0.552 | 0.148 |
| BXD010 | -0.199 | -0.063 |
| BXD011 | -0.347 | -0.298 |
| BXD03 | -0.384 | -0.376 |
| BXD04 | -0.575 | -0.621 |
| BXD05 | -0.154 | -0.116 |
| BXD06 | 0.018 | -0.014 |
| BXD07 | 0.205 | -0.053 |
| BXD08 | -1.164 | -0.033 |
| BXD09 | 0.446 | -0.084 |
| CAST | 0.823 | -0.33 |
| CCcont | -0.041 | -0.463 |
| DS01 | 0.125 | -0.368 |
| DS02 | 0.777 | -0.605 |
| DS04 | 0.256 | 0.403 |
| DS0c | -0.905 | -0.251 |
| GP01 | -1.688 | -0.325 |
| GP02 | -1.641 | -1.049 |
| GP0c | -1.222 | -0.806 |
| NOD | -0.303 | 0.644 |
| NZO | 0.793 | 0.053 |
| PWK | -0.466 | 0.124 |
| H37Rv_KO_CtpC | -0.007 | -0.366 |
| H37Rv_KO_CtpD | -3.62 | 0.088 |
| H37Rv_KO_Rv1272 | -1.054 | -0.163 |
| H37Rv_KO_SugABC | -0.348 | -0.249 |
| H37Rv_KO_MbtN | -1.142 | -0.489 |
| Trans05 | 0.228 | -0.435 |
| macrophage_unactivated | 3.156 | 0.997 |
| IL1 | 1.783 | 0.756 |
| Rapamycin | 0.832 | 0.531 |
| Tcell | 0.052 | 0.257 |
| GMCSF | 0.85 | 0.261 |
| IFNab | 0.118 | -0.478 |
| IFNg | -0.192 | -0.037 |
| IFNg_GMCSF1 | 1.031 | -0.107 |
| Rv1432_day32 | 0.343 | 0.099 |
| Rv1565c_day32 | -0.855 | 0.077 |
| secA2_input | 0.96 | 0.186 |
| delta_Rv3594 | -1.447 | -0.228 |
| delta_Rv3717 | 0.184 | -0.541 |
| delta_Rv3811 | 0.992 | 0.26 |
| delta_Rv0954 | 0.177 | 0.028 |
| PonA1 | 1.222 | 0.732 |
| EccD1_KO | 0.398 | -0.385 |
| EspI_KO | -0.299 | 0.086 |
| PE35_KO | 0.108 | 0.516 |
| PPE68_KO | -0.56 | 0.368 |
| glycerol2 | 1.289 | 0.806 |
| lignocerate | 2.166 | 1.264 |
| oleate | -0.233 | 0.858 |
| phosphatidylcholine | 1.608 | 1.272 |
| acetate | 2.13 | 0.582 |
| glucAc | 1.334 | 0.429 |
| Rv0950ko | -0.326 | 0.172 |
| Rv1096ko | -1.264 | -0.112 |
| Rv3684ko | -0.835 | -0.167 |
| delta_otsA_trehalose | 0.128 | -0.117 |