Top 10 genes with highest correlation to Rv2652c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3493c/- | (cc=0.5069) | info on Rv3493c/- |
| Rv0692/- | (cc=0.5065) | info on Rv0692/- |
| Rv3120/- | (cc=0.506) | info on Rv3120/- |
| Rv2087/- | (cc=0.504) | info on Rv2087/- |
| Rv1274/lprB | (cc=0.4992) | info on Rv1274/lprB |
| Rv3055/- | (cc=0.4987) | info on Rv3055/- |
| Rv0865/mog | (cc=0.495) | info on Rv0865/mog |
| Rv2306B/- | (cc=0.4925) | info on Rv2306B/- |
| Rv2604c/snoP | (cc=0.4921) | info on Rv2604c/snoP |
| Rv3883c/mycP1 | (cc=0.4906) | info on Rv3883c/mycP1 |
Correlation of Rv2652c/- with Rv2087/-
Normalized LFCs for Rv2652c/-:
(description and provenance of datasets)
| Rv2652c/- | Rv2087/- | |
| Fe_supp_jason_reseq | 1.375 | 2.344 |
| low_pH_jason_reseq | -1.604 | 0.0 |
| NO_jason_reseq | -0.11 | 0.0 |
| B6_jason_reseq | -1.253 | 0.0 |
| MHCII_jason_reseq | -1.632 | 0.0 |
| Isoniazid02 | -0.308 | 0.089 |
| Rifampicin4 | 0.942 | 1.289 |
| Ethambutol3 | 0.359 | 2.23 |
| Meropenem3 | 0.0 | 2.705 |
| Vancomycin16 | -0.366 | -0.17 |
| Rv2680_day32 | 0.0 | 0.335 |
| H37Rv_KO_MarP | -0.131 | 0.0 |
| hypoxia_3wks | 1.116 | 0.0 |
| hypoxia_6wks | -0.464 | 2.955 |
| glycerol | -1.665 | -0.709 |
| cholesterol | -1.807 | 0.381 |
| AJ | 0.642 | 0.0 |
| Bibs02 | -2.099 | -0.642 |
| Bibs02c | -2.037 | 1.353 |
| BL6 | -1.56 | -0.439 |
| BL6a | -1.373 | -0.696 |
| BXD01 | -1.625 | -0.458 |
| BXD010 | -1.598 | -0.45 |
| BXD011 | -1.589 | -0.448 |
| BXD03 | -1.023 | -0.475 |
| BXD04 | -0.935 | -0.434 |
| BXD05 | -1.679 | -0.339 |
| BXD06 | -0.566 | -0.469 |
| BXD07 | -1.727 | -0.486 |
| BXD08 | -1.295 | -0.467 |
| BXD09 | -0.664 | -0.494 |
| CAST | -0.869 | 0.0 |
| CCcont | -1.578 | -0.24 |
| DS01 | 0.145 | -0.83 |
| DS02 | -2.713 | -0.764 |
| DS04 | -0.126 | -0.15 |
| DS0c | -2.292 | -0.762 |
| GP01 | -1.232 | 0.368 |
| GP02 | 0.981 | 1.656 |
| GP0c | -0.614 | 1.835 |
| NOD | -1.852 | 2.151 |
| NZO | -1.15 | -0.701 |
| PWK | -0.831 | -0.494 |
| H37Rv_KO_CtpC | 0.148 | -0.571 |
| H37Rv_KO_CtpD | -1.233 | -0.098 |
| H37Rv_KO_Rv1272 | -0.893 | 1.264 |
| H37Rv_KO_SugABC | -1.236 | -0.159 |
| H37Rv_KO_MbtN | -1.286 | 1.968 |
| Trans05 | -0.827 | 0.678 |
| macrophage_unactivated | 0.221 | 1.531 |
| IL1 | -0.694 | 0.0 |
| Rapamycin | -0.227 | 2.081 |
| Tcell | -1.049 | 0.0 |
| GMCSF | -1.096 | 1.281 |
| IFNab | 0.973 | 0.417 |
| IFNg | -0.861 | 0.0 |
| IFNg_GMCSF1 | -1.618 | 1.838 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 0.0 | 0.0 |
| secA2_input | -1.565 | -2.248 |
| delta_Rv3594 | 0.425 | 0.684 |
| delta_Rv3717 | -0.174 | 1.939 |
| delta_Rv3811 | -1.423 | 1.228 |
| delta_Rv0954 | -0.673 | -0.375 |
| PonA1 | -0.601 | 1.333 |
| EccD1_KO | 1.713 | 2.897 |
| EspI_KO | 0.953 | 1.292 |
| PE35_KO | 2.001 | 3.436 |
| PPE68_KO | 2.195 | 5.071 |
| glycerol2 | 0.0 | 0.0 |
| lignocerate | 0.0 | 0.0 |
| oleate | 0.0 | 0.0 |
| phosphatidylcholine | 0.0 | 0.0 |
| acetate | 0.0 | 0.0 |
| glucAc | 0.0 | 0.0 |
| Rv0950ko | -0.727 | 1.809 |
| Rv1096ko | 0.323 | 0.0 |
| Rv3684ko | -1.565 | -0.832 |
| delta_otsA_trehalose | 1.163 | 0.382 |