Top 10 genes with highest correlation to Rv2652c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3493c/- | (cc=0.5069) | info on Rv3493c/- |
| Rv0692/- | (cc=0.5065) | info on Rv0692/- |
| Rv3120/- | (cc=0.506) | info on Rv3120/- |
| Rv2087/- | (cc=0.504) | info on Rv2087/- |
| Rv1274/lprB | (cc=0.4992) | info on Rv1274/lprB |
| Rv3055/- | (cc=0.4987) | info on Rv3055/- |
| Rv0865/mog | (cc=0.495) | info on Rv0865/mog |
| Rv2306B/- | (cc=0.4925) | info on Rv2306B/- |
| Rv2604c/snoP | (cc=0.4921) | info on Rv2604c/snoP |
| Rv3883c/mycP1 | (cc=0.4906) | info on Rv3883c/mycP1 |
Correlation of Rv2652c/- with Rv3493c/-
Normalized LFCs for Rv2652c/-:
(description and provenance of datasets)
| Rv2652c/- | Rv3493c/- | |
| Fe_supp_jason_reseq | 1.375 | -0.365 |
| low_pH_jason_reseq | -1.604 | -1.718 |
| NO_jason_reseq | -0.11 | -0.819 |
| B6_jason_reseq | -1.253 | -1.714 |
| MHCII_jason_reseq | -1.632 | -2.063 |
| Isoniazid02 | -0.308 | -0.343 |
| Rifampicin4 | 0.942 | 0.596 |
| Ethambutol3 | 0.359 | 0.071 |
| Meropenem3 | 0.0 | -0.761 |
| Vancomycin16 | -0.366 | 0.35 |
| Rv2680_day32 | 0.0 | 0.423 |
| H37Rv_KO_MarP | -0.131 | -0.598 |
| hypoxia_3wks | 1.116 | 0.231 |
| hypoxia_6wks | -0.464 | -0.965 |
| glycerol | -1.665 | -1.102 |
| cholesterol | -1.807 | -3.343 |
| AJ | 0.642 | -1.403 |
| Bibs02 | -2.099 | -2.628 |
| Bibs02c | -2.037 | -2.657 |
| BL6 | -1.56 | -2.762 |
| BL6a | -1.373 | -2.847 |
| BXD01 | -1.625 | -1.604 |
| BXD010 | -1.598 | -2.712 |
| BXD011 | -1.589 | -2.085 |
| BXD03 | -1.023 | -2.006 |
| BXD04 | -0.935 | -1.272 |
| BXD05 | -1.679 | -1.191 |
| BXD06 | -0.566 | -2.114 |
| BXD07 | -1.727 | -1.87 |
| BXD08 | -1.295 | -2.601 |
| BXD09 | -0.664 | -2.153 |
| CAST | -0.869 | -2.836 |
| CCcont | -1.578 | -0.966 |
| DS01 | 0.145 | -3.29 |
| DS02 | -2.713 | -2.108 |
| DS04 | -0.126 | -1.717 |
| DS0c | -2.292 | -2.102 |
| GP01 | -1.232 | 0.502 |
| GP02 | 0.981 | -0.556 |
| GP0c | -0.614 | -0.416 |
| NOD | -1.852 | -2.605 |
| NZO | -1.15 | -1.166 |
| PWK | -0.831 | -2.345 |
| H37Rv_KO_CtpC | 0.148 | -2.489 |
| H37Rv_KO_CtpD | -1.233 | -2.221 |
| H37Rv_KO_Rv1272 | -0.893 | -0.943 |
| H37Rv_KO_SugABC | -1.236 | 0.799 |
| H37Rv_KO_MbtN | -1.286 | 1.151 |
| Trans05 | -0.827 | -0.569 |
| macrophage_unactivated | 0.221 | -1.092 |
| IL1 | -0.694 | 1.975 |
| Rapamycin | -0.227 | 2.949 |
| Tcell | -1.049 | 0.642 |
| GMCSF | -1.096 | -1.18 |
| IFNab | 0.973 | -1.769 |
| IFNg | -0.861 | -1.267 |
| IFNg_GMCSF1 | -1.618 | -1.244 |
| Rv1432_day32 | 0.0 | -2.092 |
| Rv1565c_day32 | 0.0 | -2.088 |
| secA2_input | -1.565 | -0.294 |
| delta_Rv3594 | 0.425 | 0.112 |
| delta_Rv3717 | -0.174 | -0.077 |
| delta_Rv3811 | -1.423 | -0.973 |
| delta_Rv0954 | -0.673 | -0.411 |
| PonA1 | -0.601 | 0.664 |
| EccD1_KO | 1.713 | 1.796 |
| EspI_KO | 0.953 | 0.961 |
| PE35_KO | 2.001 | 0.758 |
| PPE68_KO | 2.195 | 1.705 |
| glycerol2 | 0.0 | -0.787 |
| lignocerate | 0.0 | 0.358 |
| oleate | 0.0 | 1.018 |
| phosphatidylcholine | 0.0 | -0.517 |
| acetate | 0.0 | -0.201 |
| glucAc | 0.0 | -0.478 |
| Rv0950ko | -0.727 | 0.464 |
| Rv1096ko | 0.323 | 1.502 |
| Rv3684ko | -1.565 | 0.504 |
| delta_otsA_trehalose | 1.163 | 0.861 |