Top 10 genes with highest correlation to Rv2615c/PE_PGRS45:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0978c/PE_PGRS17 | (cc=0.5874) | info on Rv0978c/PE_PGRS17 |
| Rv0551c/fadD8 | (cc=0.5286) | info on Rv0551c/fadD8 |
| Rv0849/- | (cc=0.5058) | info on Rv0849/- |
| Rv2578c/- | (cc=0.4987) | info on Rv2578c/- |
| Rv2489c/- | (cc=0.4917) | info on Rv2489c/- |
| Rv2306A/- | (cc=0.4897) | info on Rv2306A/- |
| Rv1864c/- | (cc=0.4878) | info on Rv1864c/- |
| Rv0377/- | (cc=0.4764) | info on Rv0377/- |
| Rv1843c/guaB1 | (cc=0.4746) | info on Rv1843c/guaB1 |
| Rv3577/- | (cc=0.4718) | info on Rv3577/- |
Correlation of Rv2615c/PE_PGRS45 with Rv2578c/-
Normalized LFCs for Rv2615c/PE_PGRS45:
(description and provenance of datasets)
| Rv2615c/PE_PGRS45 | Rv2578c/- | |
| Fe_supp_jason_reseq | -1.085 | -0.804 |
| low_pH_jason_reseq | -0.669 | 0.843 |
| NO_jason_reseq | 0.097 | 0.473 |
| B6_jason_reseq | -0.357 | -0.467 |
| MHCII_jason_reseq | 0.148 | 0.441 |
| Isoniazid02 | -1.291 | -0.228 |
| Rifampicin4 | 0.352 | -0.038 |
| Ethambutol3 | -0.563 | 0.0 |
| Meropenem3 | -0.575 | -0.338 |
| Vancomycin16 | -0.761 | 0.21 |
| Rv2680_day32 | 0.016 | 0.382 |
| H37Rv_KO_MarP | 0.525 | 0.281 |
| hypoxia_3wks | -0.211 | 0.116 |
| hypoxia_6wks | -0.251 | -0.092 |
| glycerol | 0.085 | 0.05 |
| cholesterol | 0.553 | -0.193 |
| AJ | 0.524 | -0.165 |
| Bibs02 | 0.233 | -0.257 |
| Bibs02c | -0.303 | -0.164 |
| BL6 | -1.318 | -0.443 |
| BL6a | -1.037 | -0.702 |
| BXD01 | -0.763 | -1.127 |
| BXD010 | -0.546 | -0.713 |
| BXD011 | -0.832 | -0.63 |
| BXD03 | -0.401 | -0.577 |
| BXD04 | -0.766 | -0.612 |
| BXD05 | 0.033 | -0.901 |
| BXD06 | -0.872 | -0.91 |
| BXD07 | -0.697 | -0.578 |
| BXD08 | -0.809 | -0.381 |
| BXD09 | -0.68 | -0.668 |
| CAST | 0.267 | 0.14 |
| CCcont | -1.5 | -1.072 |
| DS01 | -0.181 | -0.152 |
| DS02 | -0.054 | -0.126 |
| DS04 | -0.187 | 0.874 |
| DS0c | -0.209 | -0.055 |
| GP01 | -0.193 | -0.275 |
| GP02 | 0.154 | -0.245 |
| GP0c | -0.407 | -0.825 |
| NOD | -0.49 | -0.465 |
| NZO | 0.431 | 0.526 |
| PWK | 0.06 | 0.307 |
| H37Rv_KO_CtpC | -0.417 | -0.708 |
| H37Rv_KO_CtpD | -0.886 | 0.679 |
| H37Rv_KO_Rv1272 | -0.628 | 0.317 |
| H37Rv_KO_SugABC | -0.82 | -1.454 |
| H37Rv_KO_MbtN | 0.293 | 0.128 |
| Trans05 | -1.047 | -0.374 |
| macrophage_unactivated | -1.01 | -1.881 |
| IL1 | -1.118 | -0.033 |
| Rapamycin | -0.982 | 0.034 |
| Tcell | -1.342 | -1.004 |
| GMCSF | 0.57 | 0.52 |
| IFNab | -0.457 | -0.423 |
| IFNg | -0.457 | -0.714 |
| IFNg_GMCSF1 | -0.028 | -0.289 |
| Rv1432_day32 | 0.678 | 0.141 |
| Rv1565c_day32 | 0.477 | -0.362 |
| secA2_input | -0.477 | 0.564 |
| delta_Rv3594 | -0.349 | 0.139 |
| delta_Rv3717 | -0.449 | -0.711 |
| delta_Rv3811 | -0.937 | -1.025 |
| delta_Rv0954 | -0.053 | -0.125 |
| PonA1 | 0.194 | -0.723 |
| EccD1_KO | 0.372 | 0.398 |
| EspI_KO | 0.351 | 0.918 |
| PE35_KO | 0.33 | -0.271 |
| PPE68_KO | -0.211 | 0.442 |
| glycerol2 | -1.702 | -0.622 |
| lignocerate | -0.967 | -0.723 |
| oleate | -1.344 | -0.5 |
| phosphatidylcholine | -1.139 | -0.59 |
| acetate | -0.755 | -0.088 |
| glucAc | -0.125 | -0.172 |
| Rv0950ko | 0.124 | 0.103 |
| Rv1096ko | 0.184 | 0.051 |
| Rv3684ko | -0.069 | 0.056 |
| delta_otsA_trehalose | 2.564 | 0.472 |