Top 10 genes with highest correlation to Rv2615c/PE_PGRS45:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0978c/PE_PGRS17 | (cc=0.5874) | info on Rv0978c/PE_PGRS17 |
| Rv0551c/fadD8 | (cc=0.5286) | info on Rv0551c/fadD8 |
| Rv0849/- | (cc=0.5058) | info on Rv0849/- |
| Rv2578c/- | (cc=0.4987) | info on Rv2578c/- |
| Rv2489c/- | (cc=0.4917) | info on Rv2489c/- |
| Rv2306A/- | (cc=0.4897) | info on Rv2306A/- |
| Rv1864c/- | (cc=0.4878) | info on Rv1864c/- |
| Rv0377/- | (cc=0.4764) | info on Rv0377/- |
| Rv1843c/guaB1 | (cc=0.4746) | info on Rv1843c/guaB1 |
| Rv3577/- | (cc=0.4718) | info on Rv3577/- |
Correlation of Rv2615c/PE_PGRS45 with Rv0978c/PE_PGRS17
Normalized LFCs for Rv2615c/PE_PGRS45:
(description and provenance of datasets)
| Rv2615c/PE_PGRS45 | Rv0978c/PE_PGRS17 | |
| Fe_supp_jason_reseq | -1.085 | -0.218 |
| low_pH_jason_reseq | -0.669 | -0.94 |
| NO_jason_reseq | 0.097 | 0.1 |
| B6_jason_reseq | -0.357 | 0.54 |
| MHCII_jason_reseq | 0.148 | -0.144 |
| Isoniazid02 | -1.291 | -1.067 |
| Rifampicin4 | 0.352 | 0.219 |
| Ethambutol3 | -0.563 | -0.663 |
| Meropenem3 | -0.575 | -0.321 |
| Vancomycin16 | -0.761 | -0.454 |
| Rv2680_day32 | 0.016 | 0.33 |
| H37Rv_KO_MarP | 0.525 | 0.556 |
| hypoxia_3wks | -0.211 | 0.682 |
| hypoxia_6wks | -0.251 | 0.946 |
| glycerol | 0.085 | 0.511 |
| cholesterol | 0.553 | 0.166 |
| AJ | 0.524 | 0.363 |
| Bibs02 | 0.233 | 0.526 |
| Bibs02c | -0.303 | -0.326 |
| BL6 | -1.318 | 0.173 |
| BL6a | -1.037 | 0.047 |
| BXD01 | -0.763 | 0.137 |
| BXD010 | -0.546 | -0.018 |
| BXD011 | -0.832 | 0.199 |
| BXD03 | -0.401 | -0.062 |
| BXD04 | -0.766 | 0.579 |
| BXD05 | 0.033 | 0.311 |
| BXD06 | -0.872 | 0.161 |
| BXD07 | -0.697 | 0.192 |
| BXD08 | -0.809 | -0.213 |
| BXD09 | -0.68 | -0.095 |
| CAST | 0.267 | 0.023 |
| CCcont | -1.5 | -0.391 |
| DS01 | -0.181 | 0.181 |
| DS02 | -0.054 | 0.038 |
| DS04 | -0.187 | -0.326 |
| DS0c | -0.209 | 0.159 |
| GP01 | -0.193 | 0.998 |
| GP02 | 0.154 | 0.496 |
| GP0c | -0.407 | 0.437 |
| NOD | -0.49 | -0.28 |
| NZO | 0.431 | 0.221 |
| PWK | 0.06 | -0.192 |
| H37Rv_KO_CtpC | -0.417 | -0.086 |
| H37Rv_KO_CtpD | -0.886 | 0.047 |
| H37Rv_KO_Rv1272 | -0.628 | -0.035 |
| H37Rv_KO_SugABC | -0.82 | -0.146 |
| H37Rv_KO_MbtN | 0.293 | 0.149 |
| Trans05 | -1.047 | -0.554 |
| macrophage_unactivated | -1.01 | -0.366 |
| IL1 | -1.118 | -0.469 |
| Rapamycin | -0.982 | -0.592 |
| Tcell | -1.342 | -0.378 |
| GMCSF | 0.57 | 0.325 |
| IFNab | -0.457 | -0.68 |
| IFNg | -0.457 | -0.027 |
| IFNg_GMCSF1 | -0.028 | -0.258 |
| Rv1432_day32 | 0.678 | -0.021 |
| Rv1565c_day32 | 0.477 | 0.616 |
| secA2_input | -0.477 | -0.133 |
| delta_Rv3594 | -0.349 | -0.02 |
| delta_Rv3717 | -0.449 | -0.521 |
| delta_Rv3811 | -0.937 | -0.311 |
| delta_Rv0954 | -0.053 | 0.231 |
| PonA1 | 0.194 | 0.233 |
| EccD1_KO | 0.372 | 0.615 |
| EspI_KO | 0.351 | 1.243 |
| PE35_KO | 0.33 | 0.195 |
| PPE68_KO | -0.211 | 0.403 |
| glycerol2 | -1.702 | -0.126 |
| lignocerate | -0.967 | -0.357 |
| oleate | -1.344 | 0.187 |
| phosphatidylcholine | -1.139 | -0.085 |
| acetate | -0.755 | -0.798 |
| glucAc | -0.125 | -0.313 |
| Rv0950ko | 0.124 | 0.597 |
| Rv1096ko | 0.184 | 0.51 |
| Rv3684ko | -0.069 | 0.18 |
| delta_otsA_trehalose | 2.564 | 1.285 |