Top 10 genes with highest correlation to Rv2596/vapC40:
update plot | correlation | link to info on gene |
---|---|---|
Rv2490c/PE_PGRS43 | (cc=0.4561) | info on Rv2490c/PE_PGRS43 |
Rv2474c/- | (cc=0.4384) | info on Rv2474c/- |
Rv0278c/PE_PGRS3 | (cc=0.4204) | info on Rv0278c/PE_PGRS3 |
Rv0649/fabD2 | (cc=0.4066) | info on Rv0649/fabD2 |
Rv2076c/- | (cc=0.404) | info on Rv2076c/- |
Rv2464c/- | (cc=0.3995) | info on Rv2464c/- |
Rv2603c/- | (cc=0.3969) | info on Rv2603c/- |
Rv3335c/- | (cc=0.3966) | info on Rv3335c/- |
Rv2590/fadD9 | (cc=0.3951) | info on Rv2590/fadD9 |
Rv0103c/ctpB | (cc=0.3839) | info on Rv0103c/ctpB |
Correlation of Rv2596/vapC40 with Rv0103c/ctpB
Normalized LFCs for Rv2596/vapC40:
(description and provenance of datasets)
Rv2596/vapC40 | Rv0103c/ctpB | |
Fe_supp_jason_reseq | -0.341 | 0.06 |
low_pH_jason_reseq | -1.031 | -0.805 |
NO_jason_reseq | -0.383 | -0.52 |
B6_jason_reseq | 0.031 | 0.484 |
MHCII_jason_reseq | 0.499 | 0.859 |
Isoniazid02 | 0.792 | -0.071 |
Rifampicin4 | 0.317 | 0.295 |
Ethambutol3 | 0.061 | -0.05 |
Meropenem3 | 0.155 | 0.184 |
Vancomycin16 | 0.493 | 0.615 |
Rv2680_day32 | 0.33 | -0.142 |
H37Rv_KO_MarP | -0.008 | 0.581 |
hypoxia_3wks | -0.08 | -0.088 |
hypoxia_6wks | 0.248 | 0.219 |
glycerol | 0.693 | -0.638 |
cholesterol | -0.044 | -0.313 |
AJ | -0.284 | -0.126 |
Bibs02 | -0.123 | -0.115 |
Bibs02c | -0.371 | -0.494 |
BL6 | 0.167 | -0.422 |
BL6a | -0.121 | -0.844 |
BXD01 | -0.063 | -0.211 |
BXD010 | -0.071 | -0.739 |
BXD011 | 0.565 | -0.183 |
BXD03 | -0.179 | -1.053 |
BXD04 | -0.352 | -0.581 |
BXD05 | -0.008 | -0.667 |
BXD06 | -0.044 | -0.512 |
BXD07 | 0.129 | -0.633 |
BXD08 | 0.239 | 0.027 |
BXD09 | 0.061 | -0.624 |
CAST | -0.509 | 0.153 |
CCcont | 0.078 | -0.447 |
DS01 | -0.159 | 0.373 |
DS02 | -0.058 | 0.441 |
DS04 | 0.122 | 0.469 |
DS0c | -0.231 | 0.086 |
GP01 | -0.162 | -0.642 |
GP02 | 0.523 | -0.143 |
GP0c | -0.155 | -0.855 |
NOD | -0.306 | -0.083 |
NZO | -0.292 | -0.315 |
PWK | 0.108 | -0.024 |
H37Rv_KO_CtpC | -1.074 | -0.681 |
H37Rv_KO_CtpD | 0.617 | 0.382 |
H37Rv_KO_Rv1272 | -0.25 | -1.039 |
H37Rv_KO_SugABC | 0.163 | 0.0 |
H37Rv_KO_MbtN | 0.463 | -0.228 |
Trans05 | -0.08 | -0.349 |
macrophage_unactivated | -0.221 | -0.458 |
IL1 | -0.133 | -0.341 |
Rapamycin | -0.074 | -0.915 |
Tcell | -0.482 | -0.808 |
GMCSF | 0.597 | -0.055 |
IFNab | -0.314 | -0.169 |
IFNg | -0.053 | 0.072 |
IFNg_GMCSF1 | -0.723 | -0.245 |
Rv1432_day32 | 0.434 | 2.207 |
Rv1565c_day32 | 0.115 | -0.153 |
secA2_input | 1.384 | 1.234 |
delta_Rv3594 | 0.268 | -0.292 |
delta_Rv3717 | 0.386 | -0.316 |
delta_Rv3811 | -0.544 | -0.171 |
delta_Rv0954 | -0.204 | 0.159 |
PonA1 | 0.694 | -0.03 |
EccD1_KO | -0.174 | -0.181 |
EspI_KO | 0.85 | -0.65 |
PE35_KO | 0.28 | -0.831 |
PPE68_KO | 0.163 | -0.832 |
glycerol2 | 0.321 | 0.315 |
lignocerate | 0.621 | 0.409 |
oleate | 0.337 | 0.23 |
phosphatidylcholine | 0.613 | 0.389 |
acetate | 0.61 | 0.64 |
glucAc | 0.507 | 0.412 |
Rv0950ko | 0.89 | 0.829 |
Rv1096ko | -0.398 | 0.38 |
Rv3684ko | 0.599 | 0.472 |
delta_otsA_trehalose | -0.69 | 1.121 |