Top 10 genes with highest correlation to Rv2594c/ruvC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3139/fadE24 | (cc=0.6078) | info on Rv3139/fadE24 |
| Rv3577/- | (cc=0.5449) | info on Rv3577/- |
| Rv2516c/- | (cc=0.518) | info on Rv2516c/- |
| Rv0436c/pssA | (cc=0.5065) | info on Rv0436c/pssA |
| Rv0437c/psd | (cc=0.4974) | info on Rv0437c/psd |
| Rv0551c/fadD8 | (cc=0.4896) | info on Rv0551c/fadD8 |
| Rv0143c/- | (cc=0.4891) | info on Rv0143c/- |
| Rv3742c/- | (cc=0.4885) | info on Rv3742c/- |
| Rv1068c/PE_PGRS20 | (cc=0.4855) | info on Rv1068c/PE_PGRS20 |
| Rv1347c/mbtK | (cc=0.481) | info on Rv1347c/mbtK |
Correlation of Rv2594c/ruvC with Rv2516c/-
Normalized LFCs for Rv2594c/ruvC:
(description and provenance of datasets)
| Rv2594c/ruvC | Rv2516c/- | |
| Fe_supp_jason_reseq | 0.218 | 0.991 |
| low_pH_jason_reseq | 0.0 | 0.0 |
| NO_jason_reseq | 0.0 | -0.362 |
| B6_jason_reseq | 0.0 | -0.153 |
| MHCII_jason_reseq | 0.0 | 0.0 |
| Isoniazid02 | -0.351 | -0.551 |
| Rifampicin4 | -1.026 | -2.708 |
| Ethambutol3 | -0.461 | -0.851 |
| Meropenem3 | -0.289 | -1.336 |
| Vancomycin16 | -1.005 | -0.639 |
| Rv2680_day32 | 0.0 | 0.0 |
| H37Rv_KO_MarP | 0.0 | -0.92 |
| hypoxia_3wks | 0.0 | -1.132 |
| hypoxia_6wks | 0.0 | -1.167 |
| glycerol | 0.0 | 0.0 |
| cholesterol | 0.0 | -0.145 |
| AJ | 0.0 | -0.232 |
| Bibs02 | 0.0 | -0.183 |
| Bibs02c | 0.0 | -0.209 |
| BL6 | 0.0 | -0.125 |
| BL6a | 0.0 | -0.198 |
| BXD01 | 0.0 | -0.13 |
| BXD010 | 0.0 | 0.323 |
| BXD011 | 0.0 | -0.127 |
| BXD03 | 0.0 | -0.135 |
| BXD04 | 0.0 | -0.124 |
| BXD05 | 0.0 | 0.235 |
| BXD06 | 0.0 | -0.133 |
| BXD07 | 0.0 | -0.138 |
| BXD08 | 0.0 | -0.133 |
| BXD09 | 0.0 | -0.14 |
| CAST | 0.0 | -0.23 |
| CCcont | 0.733 | 2.595 |
| DS01 | 0.0 | 0.0 |
| DS02 | 0.0 | -0.217 |
| DS04 | 0.0 | -0.194 |
| DS0c | 0.0 | -0.217 |
| GP01 | 0.0 | -0.099 |
| GP02 | 0.0 | -0.083 |
| GP0c | 0.0 | -0.13 |
| NOD | 0.0 | -0.225 |
| NZO | 0.0 | -0.199 |
| PWK | 0.0 | -0.196 |
| H37Rv_KO_CtpC | 0.0 | -0.162 |
| H37Rv_KO_CtpD | 0.0 | -0.127 |
| H37Rv_KO_Rv1272 | 0.0 | -0.141 |
| H37Rv_KO_SugABC | 0.0 | -0.099 |
| H37Rv_KO_MbtN | 0.0 | -0.103 |
| Trans05 | 0.0 | -0.131 |
| macrophage_unactivated | 0.0 | -1.146 |
| IL1 | 0.0 | -0.685 |
| Rapamycin | 0.0 | -0.709 |
| Tcell | 0.0 | -1.906 |
| GMCSF | 0.0 | 0.0 |
| IFNab | 0.0 | 0.741 |
| IFNg | 0.0 | 0.275 |
| IFNg_GMCSF1 | 0.0 | -0.726 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 0.0 | 0.0 |
| secA2_input | 0.412 | 0.504 |
| delta_Rv3594 | 0.211 | 0.895 |
| delta_Rv3717 | 0.0 | 0.736 |
| delta_Rv3811 | 0.0 | 1.328 |
| delta_Rv0954 | 0.99 | 1.541 |
| PonA1 | 0.304 | -0.56 |
| EccD1_KO | 0.0 | -2.611 |
| EspI_KO | -0.394 | -1.748 |
| PE35_KO | 0.703 | -0.898 |
| PPE68_KO | 0.0 | -0.771 |
| glycerol2 | 0.0 | -1.113 |
| lignocerate | 0.0 | -0.746 |
| oleate | 0.0 | -1.955 |
| phosphatidylcholine | 0.0 | -0.859 |
| acetate | 0.63 | 0.422 |
| glucAc | 0.0 | 0.526 |
| Rv0950ko | 0.38 | 0.669 |
| Rv1096ko | 0.38 | 2.075 |
| Rv3684ko | 0.789 | 0.498 |
| delta_otsA_trehalose | 1.482 | 0.254 |