Top 10 genes with highest correlation to Rv2576c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2415c/- | (cc=0.5417) | info on Rv2415c/- |
| Rv2570/- | (cc=0.5292) | info on Rv2570/- |
| Rv2303c/- | (cc=0.5087) | info on Rv2303c/- |
| Rv1735c/- | (cc=0.4492) | info on Rv1735c/- |
| Rv3017c/esxQ | (cc=0.4484) | info on Rv3017c/esxQ |
| Rv2296/- | (cc=0.4379) | info on Rv2296/- |
| Rv2266/cyp124 | (cc=0.432) | info on Rv2266/cyp124 |
| Rv1970/lprM | (cc=0.4071) | info on Rv1970/lprM |
| Rv2270/lppN | (cc=0.4059) | info on Rv2270/lppN |
| Rv2881c/cdsA | (cc=0.4001) | info on Rv2881c/cdsA |
Correlation of Rv2576c/- with Rv1970/lprM
Normalized LFCs for Rv2576c/-:
(description and provenance of datasets)
| Rv2576c/- | Rv1970/lprM | |
| Fe_supp_jason_reseq | 0.33 | -2.152 |
| low_pH_jason_reseq | 0.159 | -2.28 |
| NO_jason_reseq | 0.357 | 0.69 |
| B6_jason_reseq | -0.223 | -0.909 |
| MHCII_jason_reseq | 0.481 | -0.886 |
| Isoniazid02 | 0.276 | -3.918 |
| Rifampicin4 | -0.615 | 0.861 |
| Ethambutol3 | -0.213 | -2.342 |
| Meropenem3 | 0.037 | -3.996 |
| Vancomycin16 | 0.34 | -1.072 |
| Rv2680_day32 | -0.201 | 0.245 |
| H37Rv_KO_MarP | 0.223 | 1.081 |
| hypoxia_3wks | 0.782 | -0.618 |
| hypoxia_6wks | 0.305 | 0.18 |
| glycerol | 0.513 | -0.976 |
| cholesterol | -0.269 | -0.31 |
| AJ | -0.624 | -0.728 |
| Bibs02 | 0.845 | 0.821 |
| Bibs02c | 0.473 | 0.599 |
| BL6 | -0.766 | -2.08 |
| BL6a | 0.099 | -0.077 |
| BXD01 | 0.428 | -0.375 |
| BXD010 | -0.019 | -1.906 |
| BXD011 | 0.0 | -0.129 |
| BXD03 | -0.945 | -0.424 |
| BXD04 | -0.032 | 1.231 |
| BXD05 | 0.492 | 0.216 |
| BXD06 | -0.264 | 1.515 |
| BXD07 | -0.088 | 0.268 |
| BXD08 | -0.041 | -0.107 |
| BXD09 | 0.138 | 0.483 |
| CAST | -0.843 | -0.722 |
| CCcont | -0.558 | -1.63 |
| DS01 | 0.233 | 0.089 |
| DS02 | -0.35 | 0.277 |
| DS04 | 1.046 | 0.921 |
| DS0c | -0.47 | 0.523 |
| GP01 | 0.86 | 1.387 |
| GP02 | 1.853 | 1.964 |
| GP0c | 0.66 | 1.151 |
| NOD | -0.083 | -1.228 |
| NZO | -0.182 | -0.118 |
| PWK | -0.125 | -0.467 |
| H37Rv_KO_CtpC | 0.686 | 1.478 |
| H37Rv_KO_CtpD | -0.54 | -0.87 |
| H37Rv_KO_Rv1272 | 0.86 | -0.028 |
| H37Rv_KO_SugABC | 0.303 | 2.408 |
| H37Rv_KO_MbtN | -0.16 | -0.437 |
| Trans05 | 1.217 | 1.621 |
| macrophage_unactivated | -0.319 | -0.761 |
| IL1 | -0.919 | 0.11 |
| Rapamycin | 0.209 | 0.826 |
| Tcell | 0.264 | 0.567 |
| GMCSF | 0.18 | -0.752 |
| IFNab | -0.514 | -0.23 |
| IFNg | -0.476 | -1.419 |
| IFNg_GMCSF1 | -0.635 | 0.0 |
| Rv1432_day32 | -0.671 | 0.209 |
| Rv1565c_day32 | 0.092 | -0.671 |
| secA2_input | -0.178 | 0.394 |
| delta_Rv3594 | 0.248 | 1.075 |
| delta_Rv3717 | 0.109 | 1.603 |
| delta_Rv3811 | 0.381 | 1.609 |
| delta_Rv0954 | -0.933 | 0.282 |
| PonA1 | 0.77 | 1.777 |
| EccD1_KO | 1.246 | 2.805 |
| EspI_KO | 1.417 | 2.718 |
| PE35_KO | 0.846 | 3.244 |
| PPE68_KO | 0.646 | 3.827 |
| glycerol2 | -0.275 | -1.775 |
| lignocerate | -0.268 | -1.543 |
| oleate | -0.19 | -1.009 |
| phosphatidylcholine | 0.043 | -1.273 |
| acetate | -1.237 | 1.942 |
| glucAc | -0.968 | -1.508 |
| Rv0950ko | 0.437 | 0.16 |
| Rv1096ko | -0.326 | -0.522 |
| Rv3684ko | 0.131 | -0.773 |
| delta_otsA_trehalose | -0.688 | 0.341 |