TnSeqCorr

Top 10 genes with highest correlation to Rv2484c/-:

update plotcorrelationlink to info on gene
Rv3655c/- (cc=0.6279) info on Rv3655c/-
Rv3276c/purK (cc=0.5693) info on Rv3276c/purK
Rv2250A/- (cc=0.5622) info on Rv2250A/-
Rv1773c/- (cc=0.558) info on Rv1773c/-
Rv0447c/ufaA1 (cc=0.557) info on Rv0447c/ufaA1
Rv1735c/- (cc=0.5542) info on Rv1735c/-
Rv2701c/suhB (cc=0.5415) info on Rv2701c/suhB
Rv0583c/lpqN (cc=0.5411) info on Rv0583c/lpqN
Rv2285/- (cc=0.5247) info on Rv2285/-
Rv2624c/- (cc=0.5243) info on Rv2624c/-

Correlation of Rv2484c/- with Rv3276c/purK

Normalized LFCs for Rv2484c/-:
(description and provenance of datasets)
Rv2484c/-Rv3276c/purK
Fe_supp_jason_reseq

-0.219

0.0

low_pH_jason_reseq

-0.897

0.0

NO_jason_reseq

0.488

0.0

B6_jason_reseq

0.555

0.0

MHCII_jason_reseq

0.566

0.0

Isoniazid02

1.072

-0.146

Rifampicin4

-0.46

-1.21

Ethambutol3

2.559

2.247

Meropenem3

0.424

-0.701

Vancomycin16

0.207

-0.854

Rv2680_day32

-0.358

-0.131

H37Rv_KO_MarP

0.093

0.423

hypoxia_3wks

-0.044

0.0

hypoxia_6wks

0.069

0.0

glycerol

-0.298

0.385

cholesterol

0.171

0.89

AJ

0.218

0.0

Bibs02

-0.244

0.0

Bibs02c

-0.279

0.209

BL6

-0.58

0.0

BL6a

-0.689

0.0

BXD01

-0.744

0.0

BXD010

-0.494

0.0

BXD011

-0.565

0.0

BXD03

-0.374

0.0

BXD04

0.471

0.0

BXD05

-0.1

0.0

BXD06

-0.579

0.0

BXD07

0.172

0.0

BXD08

-0.063

0.0

BXD09

-0.413

0.0

CAST

0.217

0.0

CCcont

-1.236

0.0

DS01

-0.245

0.0

DS02

-0.51

0.0

DS04

0.444

0.0

DS0c

-0.116

0.0

GP01

-0.972

0.0

GP02

0.48

0.0

GP0c

-0.899

0.0

NOD

-0.044

0.428

NZO

-0.325

0.0

PWK

0.266

0.539

H37Rv_KO_CtpC

-0.966

0.0

H37Rv_KO_CtpD

-0.601

0.0

H37Rv_KO_Rv1272

-0.683

0.0

H37Rv_KO_SugABC

-0.192

0.0

H37Rv_KO_MbtN

-1.086

0.0

Trans05

-0.689

0.0

macrophage_unactivated

-1.332

0.0

IL1

-0.457

0.0

Rapamycin

-0.657

0.0

Tcell

-0.697

0.0

GMCSF

-1.077

0.0

IFNab

-0.538

0.0

IFNg

-0.056

0.0

IFNg_GMCSF1

-0.635

0.0

Rv1432_day32

0.392

0.0

Rv1565c_day32

-0.256

0.0

secA2_input

0.232

0.593

delta_Rv3594

-0.288

0.211

delta_Rv3717

-0.237

0.0

delta_Rv3811

-0.706

0.391

delta_Rv0954

0.37

0.0

PonA1

-0.171

0.0

EccD1_KO

0.878

0.454

EspI_KO

0.06

0.0

PE35_KO

1.476

1.105

PPE68_KO

1.427

1.213

glycerol2

-1.687

0.0

lignocerate

-0.616

0.0

oleate

1.212

0.0

phosphatidylcholine

-0.053

0.0

acetate

-1.257

0.0

glucAc

-2.19

0.0

Rv0950ko

0.38

0.416

Rv1096ko

1.152

1.143

Rv3684ko

1.867

2.509

delta_otsA_trehalose

-0.16

0.0