Top 10 genes with highest correlation to Rv2456c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1831/- | (cc=0.6179) | info on Rv1831/- |
| Rv2663/- | (cc=0.5981) | info on Rv2663/- |
| Rv3689/- | (cc=0.5823) | info on Rv3689/- |
| Rv2833c/ugpB | (cc=0.5803) | info on Rv2833c/ugpB |
| Rv1387/PPE20 | (cc=0.5712) | info on Rv1387/PPE20 |
| Rv0188/- | (cc=0.5689) | info on Rv0188/- |
| Rv3210c/- | (cc=0.5684) | info on Rv3210c/- |
| Rv3842c/glpQ1 | (cc=0.562) | info on Rv3842c/glpQ1 |
| Rv2243/fabD | (cc=0.5364) | info on Rv2243/fabD |
| Rv3148/nuoD | (cc=0.5359) | info on Rv3148/nuoD |
Correlation of Rv2456c/- with Rv3210c/-
Normalized LFCs for Rv2456c/-:
(description and provenance of datasets)
| Rv2456c/- | Rv3210c/- | |
| Fe_supp_jason_reseq | -0.379 | 2.062 |
| low_pH_jason_reseq | -1.086 | -3.853 |
| NO_jason_reseq | 0.0 | -2.056 |
| B6_jason_reseq | 0.476 | -1.674 |
| MHCII_jason_reseq | -0.595 | -2.452 |
| Isoniazid02 | 0.215 | -0.351 |
| Rifampicin4 | 0.143 | -0.311 |
| Ethambutol3 | 0.591 | 0.0 |
| Meropenem3 | -0.126 | 0.0 |
| Vancomycin16 | 0.048 | -0.305 |
| Rv2680_day32 | 0.302 | 0.617 |
| H37Rv_KO_MarP | 0.071 | -3.844 |
| hypoxia_3wks | -0.423 | -5.383 |
| hypoxia_6wks | 0.355 | -2.533 |
| glycerol | -0.648 | -0.709 |
| cholesterol | 0.259 | -0.509 |
| AJ | -0.224 | -0.18 |
| Bibs02 | -0.301 | 0.132 |
| Bibs02c | -0.076 | -0.336 |
| BL6 | 0.922 | 2.786 |
| BL6a | 0.716 | 3.965 |
| BXD01 | 0.662 | 4.097 |
| BXD010 | 0.612 | 4.494 |
| BXD011 | 1.502 | 4.043 |
| BXD03 | 0.774 | 2.532 |
| BXD04 | 1.111 | 4.283 |
| BXD05 | 0.484 | 3.297 |
| BXD06 | 0.863 | 4.797 |
| BXD07 | 0.971 | 4.33 |
| BXD08 | 0.717 | 4.103 |
| BXD09 | 0.702 | 4.378 |
| CAST | 0.929 | -0.809 |
| CCcont | 0.332 | 4.389 |
| DS01 | -0.399 | 0.0 |
| DS02 | 0.0 | -0.548 |
| DS04 | -0.128 | 1.97 |
| DS0c | 0.061 | -0.168 |
| GP01 | 0.393 | -0.077 |
| GP02 | 0.291 | 0.116 |
| GP0c | 0.461 | 1.73 |
| NOD | 0.428 | -0.789 |
| NZO | 0.321 | -0.701 |
| PWK | 0.186 | -0.689 |
| H37Rv_KO_CtpC | 0.495 | 1.944 |
| H37Rv_KO_CtpD | -0.268 | 1.545 |
| H37Rv_KO_Rv1272 | 0.562 | 2.512 |
| H37Rv_KO_SugABC | -0.214 | 3.415 |
| H37Rv_KO_MbtN | 0.886 | 5.206 |
| Trans05 | 1.071 | 3.053 |
| macrophage_unactivated | -0.167 | -0.716 |
| IL1 | 0.077 | 0.341 |
| Rapamycin | -0.009 | 0.0 |
| Tcell | 0.502 | -1.619 |
| GMCSF | 0.185 | 0.721 |
| IFNab | -0.212 | 2.283 |
| IFNg | 0.195 | 1.109 |
| IFNg_GMCSF1 | 0.031 | -0.396 |
| Rv1432_day32 | 0.149 | -1.71 |
| Rv1565c_day32 | -0.442 | -3.884 |
| secA2_input | -0.092 | 1.565 |
| delta_Rv3594 | 0.138 | 0.153 |
| delta_Rv3717 | 0.457 | 0.946 |
| delta_Rv3811 | -0.303 | 0.913 |
| delta_Rv0954 | -0.521 | -3.66 |
| PonA1 | -0.433 | -5.488 |
| EccD1_KO | 0.556 | -2.457 |
| EspI_KO | 0.114 | -2.073 |
| PE35_KO | -0.12 | -3.104 |
| PPE68_KO | -0.266 | -3.161 |
| glycerol2 | 0.338 | 0.82 |
| lignocerate | 0.813 | 0.0 |
| oleate | 0.386 | 0.0 |
| phosphatidylcholine | 0.829 | 0.0 |
| acetate | 0.068 | 0.0 |
| glucAc | 0.289 | 0.392 |
| Rv0950ko | 0.416 | -0.214 |
| Rv1096ko | 0.329 | 0.178 |
| Rv3684ko | 0.37 | 0.635 |
| delta_otsA_trehalose | -1.403 | 0.0 |