TnSeqCorr

Top 10 genes with highest correlation to Rv2453c/mobA:

update plotcorrelationlink to info on gene
Rv1809/PPE33 (cc=0.5148) info on Rv1809/PPE33
Rv0981/mprA (cc=0.4897) info on Rv0981/mprA
Rv3092c/- (cc=0.4619) info on Rv3092c/-
Rv2848c/cobB (cc=0.4522) info on Rv2848c/cobB
Rv3666c/dppA (cc=0.4499) info on Rv3666c/dppA
Rv0865/mog (cc=0.4391) info on Rv0865/mog
Rv2378c/mbtG (cc=0.4353) info on Rv2378c/mbtG
Rv3238c/- (cc=0.4332) info on Rv3238c/-
Rv0084/hycD (cc=0.4259) info on Rv0084/hycD
Rv1174c/TB8.4 (cc=0.4255) info on Rv1174c/TB8.4

Correlation of Rv2453c/mobA with Rv1809/PPE33

Normalized LFCs for Rv2453c/mobA:
(description and provenance of datasets)
Rv2453c/mobARv1809/PPE33
Fe_supp_jason_reseq

-1.045

-0.895

low_pH_jason_reseq

-1.524

0.0

NO_jason_reseq

-2.029

-1.79

B6_jason_reseq

-1.237

-2.074

MHCII_jason_reseq

-0.624

-1.223

Isoniazid02

0.141

0.566

Rifampicin4

0.016

-0.084

Ethambutol3

1.013

-0.299

Meropenem3

0.698

0.585

Vancomycin16

0.244

0.22

Rv2680_day32

-2.841

-0.943

H37Rv_KO_MarP

1.758

0.12

hypoxia_3wks

-0.215

0.124

hypoxia_6wks

-0.541

-0.027

glycerol

-0.651

-0.427

cholesterol

-0.654

0.34

AJ

-0.192

-0.424

Bibs02

0.236

0.607

Bibs02c

0.546

0.881

BL6

-1.18

0.683

BL6a

0.294

0.646

BXD01

-0.855

0.211

BXD010

-0.342

0.325

BXD011

-0.538

0.089

BXD03

-0.864

0.409

BXD04

-0.271

0.501

BXD05

-0.594

0.892

BXD06

-1.302

0.305

BXD07

-0.44

0.126

BXD08

-0.124

0.141

BXD09

-0.088

0.179

CAST

-0.702

-1.098

CCcont

-0.374

0.996

DS01

0.83

1.483

DS02

0.429

1.279

DS04

0.171

0.817

DS0c

0.006

1.381

GP01

-2.224

0.817

GP02

-1.096

0.135

GP0c

-0.652

1.366

NOD

-0.6

-0.389

NZO

-0.678

-2.092

PWK

-0.632

-1.171

H37Rv_KO_CtpC

0.264

0.744

H37Rv_KO_CtpD

0.09

1.382

H37Rv_KO_Rv1272

0.318

1.874

H37Rv_KO_SugABC

-0.942

0.592

H37Rv_KO_MbtN

0.381

0.841

Trans05

-0.972

1.403

macrophage_unactivated

1.013

0.357

IL1

-0.454

1.011

Rapamycin

-0.08

1.157

Tcell

-0.772

0.414

GMCSF

1.315

1.167

IFNab

1.103

1.067

IFNg

1.165

0.959

IFNg_GMCSF1

0.899

0.811

Rv1432_day32

-1.39

-0.395

Rv1565c_day32

-0.147

-0.073

secA2_input

0.2

0.41

delta_Rv3594

-0.777

-0.509

delta_Rv3717

-1.69

-0.24

delta_Rv3811

-1.38

-0.47

delta_Rv0954

-1.488

-0.408

PonA1

-0.162

-0.955

EccD1_KO

0.418

0.934

EspI_KO

-0.128

0.87

PE35_KO

1.861

1.035

PPE68_KO

1.981

1.238

glycerol2

0.333

2.092

lignocerate

0.37

0.997

oleate

0.139

0.084

phosphatidylcholine

0.819

1.793

acetate

-0.499

0.424

glucAc

-0.065

0.253

Rv0950ko

-1.481

-0.015

Rv1096ko

-1.659

-0.368

Rv3684ko

-1.821

-0.095

delta_otsA_trehalose

0.696

0.69