Top 10 genes with highest correlation to Rv2445c/ndkA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2392/cysH | (cc=0.6185) | info on Rv2392/cysH |
| Rv0287/esxG | (cc=0.5357) | info on Rv0287/esxG |
| Rv3208/- | (cc=0.5175) | info on Rv3208/- |
| Rv2553c/- | (cc=0.4779) | info on Rv2553c/- |
| Rv3671c/- | (cc=0.4724) | info on Rv3671c/- |
| Rv3753c/- | (cc=0.4516) | info on Rv3753c/- |
| Rv2221c/glnE | (cc=0.4248) | info on Rv2221c/glnE |
| Rv3606c/folK | (cc=0.4226) | info on Rv3606c/folK |
| Rv1086/- | (cc=0.4207) | info on Rv1086/- |
| Rv1836c/- | (cc=0.4183) | info on Rv1836c/- |
Correlation of Rv2445c/ndkA with Rv1086/-
Normalized LFCs for Rv2445c/ndkA:
(description and provenance of datasets)
| Rv2445c/ndkA | Rv1086/- | |
| Fe_supp_jason_reseq | 4.9 | -0.508 |
| low_pH_jason_reseq | 0.0 | 0.694 |
| NO_jason_reseq | 0.0 | -0.845 |
| B6_jason_reseq | 0.0 | -0.649 |
| MHCII_jason_reseq | 0.0 | -0.572 |
| Isoniazid02 | 0.0 | -0.281 |
| Rifampicin4 | 0.0 | -1.836 |
| Ethambutol3 | 0.0 | -0.505 |
| Meropenem3 | 0.0 | -0.648 |
| Vancomycin16 | 0.0 | -1.799 |
| Rv2680_day32 | 0.0 | -0.239 |
| H37Rv_KO_MarP | -0.26 | -2.368 |
| hypoxia_3wks | 0.0 | -2.568 |
| hypoxia_6wks | 0.0 | -0.672 |
| glycerol | 0.0 | -0.654 |
| cholesterol | 0.0 | 1.367 |
| AJ | 0.0 | -0.983 |
| Bibs02 | 0.0 | -0.775 |
| Bibs02c | 0.0 | -0.887 |
| BL6 | 0.0 | -0.53 |
| BL6a | 0.0 | -0.839 |
| BXD01 | 0.0 | -0.552 |
| BXD010 | 0.0 | -0.543 |
| BXD011 | 0.0 | -0.54 |
| BXD03 | 0.0 | -0.315 |
| BXD04 | 0.0 | -0.4 |
| BXD05 | 0.0 | -0.57 |
| BXD06 | 0.0 | -0.566 |
| BXD07 | 0.0 | -0.587 |
| BXD08 | 0.0 | -0.564 |
| BXD09 | 0.0 | -0.596 |
| CAST | 0.0 | -0.976 |
| CCcont | 0.0 | 2.055 |
| DS01 | 0.0 | -1.001 |
| DS02 | 0.0 | -0.922 |
| DS04 | 0.0 | -0.141 |
| DS0c | 0.0 | -0.919 |
| GP01 | 0.0 | -0.418 |
| GP02 | 0.0 | -0.353 |
| GP0c | 0.0 | -0.303 |
| NOD | 0.0 | -0.952 |
| NZO | 0.0 | -0.845 |
| PWK | 0.0 | -0.831 |
| H37Rv_KO_CtpC | 0.0 | -0.242 |
| H37Rv_KO_CtpD | 0.0 | -0.092 |
| H37Rv_KO_Rv1272 | 0.0 | -0.598 |
| H37Rv_KO_SugABC | 0.0 | 0.245 |
| H37Rv_KO_MbtN | 0.0 | 0.069 |
| Trans05 | 0.0 | -0.554 |
| macrophage_unactivated | 0.0 | -0.638 |
| IL1 | 0.0 | -1.05 |
| Rapamycin | 0.0 | -0.402 |
| Tcell | 0.0 | 0.0 |
| GMCSF | 0.0 | -0.346 |
| IFNab | 0.0 | 0.363 |
| IFNg | 0.0 | 0.163 |
| IFNg_GMCSF1 | 0.0 | -0.635 |
| Rv1432_day32 | 0.0 | -0.18 |
| Rv1565c_day32 | 0.0 | -0.766 |
| secA2_input | -2.696 | -4.12 |
| delta_Rv3594 | 1.086 | 1.277 |
| delta_Rv3717 | 2.202 | 2.139 |
| delta_Rv3811 | 0.187 | 1.396 |
| delta_Rv0954 | 0.0 | -2.35 |
| PonA1 | -0.159 | -2.984 |
| EccD1_KO | -1.595 | 0.76 |
| EspI_KO | 0.0 | 1.024 |
| PE35_KO | -0.312 | -1.397 |
| PPE68_KO | 0.896 | -0.205 |
| glycerol2 | 0.0 | -0.594 |
| lignocerate | 0.0 | -2.541 |
| oleate | 0.0 | -1.815 |
| phosphatidylcholine | 0.0 | -2.762 |
| acetate | 0.0 | 0.181 |
| glucAc | 0.0 | 0.362 |
| Rv0950ko | -0.416 | -3.86 |
| Rv1096ko | 2.376 | 2.796 |
| Rv3684ko | 3.056 | 1.29 |
| delta_otsA_trehalose | 0.0 | 0.193 |