Top 10 genes with highest correlation to Rv2431c/PE25:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0989c/grcC2 | (cc=0.625) | info on Rv0989c/grcC2 |
| Rv1504c/- | (cc=0.5577) | info on Rv1504c/- |
| Rv0073/- | (cc=0.5486) | info on Rv0073/- |
| Rv0832/PE_PGRS12 | (cc=0.5339) | info on Rv0832/PE_PGRS12 |
| Rv0456B/mazE1 | (cc=0.5265) | info on Rv0456B/mazE1 |
| Rv0820/phoT | (cc=0.526) | info on Rv0820/phoT |
| Rv2352c/PPE38 | (cc=0.5239) | info on Rv2352c/PPE38 |
| Rv2268c/cyp128 | (cc=0.5114) | info on Rv2268c/cyp128 |
| Rv3679/- | (cc=0.5094) | info on Rv3679/- |
| Rv3261/fbiA | (cc=0.5055) | info on Rv3261/fbiA |
Correlation of Rv2431c/PE25 with Rv0989c/grcC2
Normalized LFCs for Rv2431c/PE25:
(description and provenance of datasets)
| Rv2431c/PE25 | Rv0989c/grcC2 | |
| Fe_supp_jason_reseq | 0.619 | 2.609 |
| low_pH_jason_reseq | 0.522 | 2.831 |
| NO_jason_reseq | -0.914 | -0.286 |
| B6_jason_reseq | -0.36 | 2.136 |
| MHCII_jason_reseq | -0.217 | 1.703 |
| Isoniazid02 | -0.931 | 0.802 |
| Rifampicin4 | -1.6 | 0.217 |
| Ethambutol3 | -1.563 | 0.289 |
| Meropenem3 | -1.653 | 0.65 |
| Vancomycin16 | -0.921 | 0.032 |
| Rv2680_day32 | -0.087 | 3.948 |
| H37Rv_KO_MarP | -0.447 | -1.853 |
| hypoxia_3wks | 0.582 | -1.519 |
| hypoxia_6wks | 0.0 | 0.451 |
| glycerol | 3.461 | 5.6 |
| cholesterol | 6.0 | 4.139 |
| AJ | 1.303 | 1.239 |
| Bibs02 | 1.457 | 4.78 |
| Bibs02c | 1.199 | 5.162 |
| BL6 | 1.457 | 4.615 |
| BL6a | 2.072 | 5.857 |
| BXD01 | 0.827 | 4.648 |
| BXD010 | 0.551 | 4.045 |
| BXD011 | 2.085 | 4.413 |
| BXD03 | 1.534 | 3.722 |
| BXD04 | 1.689 | 3.589 |
| BXD05 | 2.296 | 4.055 |
| BXD06 | 1.937 | 4.247 |
| BXD07 | 2.139 | 4.611 |
| BXD08 | 1.605 | 4.346 |
| BXD09 | 2.05 | 4.485 |
| CAST | -0.192 | 0.569 |
| CCcont | 1.232 | 4.359 |
| DS01 | 3.744 | 6.0 |
| DS02 | 3.294 | 6.0 |
| DS04 | 3.536 | 5.63 |
| DS0c | 2.665 | 5.646 |
| GP01 | 0.531 | 3.678 |
| GP02 | 0.806 | 3.906 |
| GP0c | 1.557 | 4.303 |
| NOD | 1.523 | -0.163 |
| NZO | 0.962 | 0.892 |
| PWK | 2.947 | 0.689 |
| H37Rv_KO_CtpC | 1.81 | 2.924 |
| H37Rv_KO_CtpD | 1.079 | 4.282 |
| H37Rv_KO_Rv1272 | 2.011 | 4.43 |
| H37Rv_KO_SugABC | 1.484 | 3.675 |
| H37Rv_KO_MbtN | 0.09 | 4.397 |
| Trans05 | 2.411 | 4.538 |
| macrophage_unactivated | 0.211 | 0.96 |
| IL1 | 0.561 | 0.629 |
| Rapamycin | 0.233 | -0.261 |
| Tcell | 0.72 | -0.704 |
| GMCSF | -0.304 | 0.652 |
| IFNab | 0.668 | 1.802 |
| IFNg | 0.786 | 0.179 |
| IFNg_GMCSF1 | 0.852 | -0.408 |
| Rv1432_day32 | 0.439 | 1.675 |
| Rv1565c_day32 | 5.482 | 4.63 |
| secA2_input | -1.575 | -0.294 |
| delta_Rv3594 | 0.425 | -0.381 |
| delta_Rv3717 | 0.174 | 0.414 |
| delta_Rv3811 | 0.013 | -0.211 |
| delta_Rv0954 | 1.122 | 0.074 |
| PonA1 | 0.196 | -0.892 |
| EccD1_KO | -0.72 | 0.069 |
| EspI_KO | -0.148 | 0.456 |
| PE35_KO | 0.639 | -0.642 |
| PPE68_KO | 0.64 | -0.352 |
| glycerol2 | -0.013 | -3.409 |
| lignocerate | -0.468 | -2.795 |
| oleate | 0.801 | -3.254 |
| phosphatidylcholine | 0.162 | -3.214 |
| acetate | -0.753 | 1.935 |
| glucAc | -0.664 | 0.795 |
| Rv0950ko | 0.084 | -0.585 |
| Rv1096ko | -1.197 | 0.136 |
| Rv3684ko | -0.177 | 0.124 |
| delta_otsA_trehalose | 0.513 | -1.113 |