Top 10 genes with highest correlation to Rv2410c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2411c/- | (cc=0.7193) | info on Rv2411c/- |
| Rv2409c/- | (cc=0.6507) | info on Rv2409c/- |
| Rv0692/- | (cc=0.5689) | info on Rv0692/- |
| Rv0757/phoP | (cc=0.5621) | info on Rv0757/phoP |
| Rv3647c/- | (cc=0.5585) | info on Rv3647c/- |
| Rv3058c/- | (cc=0.5528) | info on Rv3058c/- |
| Rv3616c/espA | (cc=0.5242) | info on Rv3616c/espA |
| Rv3614c/espD | (cc=0.5238) | info on Rv3614c/espD |
| Rv3197/- | (cc=0.5232) | info on Rv3197/- |
| Rv3059/cyp136 | (cc=0.522) | info on Rv3059/cyp136 |
Correlation of Rv2410c/- with Rv3616c/espA
Normalized LFCs for Rv2410c/-:
(description and provenance of datasets)
| Rv2410c/- | Rv3616c/espA | |
| Fe_supp_jason_reseq | 1.601 | 0.087 |
| low_pH_jason_reseq | -0.422 | -0.775 |
| NO_jason_reseq | -1.244 | -1.278 |
| B6_jason_reseq | 0.093 | -3.09 |
| MHCII_jason_reseq | -1.035 | -2.722 |
| Isoniazid02 | -1.087 | 0.476 |
| Rifampicin4 | -1.078 | 0.241 |
| Ethambutol3 | -0.129 | -0.018 |
| Meropenem3 | 2.311 | 0.789 |
| Vancomycin16 | 0.337 | -0.18 |
| Rv2680_day32 | -0.389 | -1.717 |
| H37Rv_KO_MarP | 1.435 | 0.381 |
| hypoxia_3wks | 0.06 | 0.024 |
| hypoxia_6wks | 0.0 | -0.098 |
| glycerol | -0.395 | -1.435 |
| cholesterol | -0.355 | -1.373 |
| AJ | -0.062 | -4.551 |
| Bibs02 | -1.118 | -4.346 |
| Bibs02c | -1.305 | -4.142 |
| BL6 | -1.732 | -3.453 |
| BL6a | -1.838 | -4.605 |
| BXD01 | -0.781 | -3.648 |
| BXD010 | -1.513 | -2.883 |
| BXD011 | -0.377 | -2.961 |
| BXD03 | -2.13 | -3.143 |
| BXD04 | -1.567 | -3.155 |
| BXD05 | -0.263 | -2.17 |
| BXD06 | -1.003 | -3.908 |
| BXD07 | -0.422 | -3.771 |
| BXD08 | -1.346 | -3.672 |
| BXD09 | -0.894 | -4.181 |
| CAST | -0.584 | -5.474 |
| CCcont | -1.86 | -1.136 |
| DS01 | -1.53 | -6.0 |
| DS02 | -2.483 | -5.764 |
| DS04 | -2.416 | -3.671 |
| DS0c | -2.013 | -5.466 |
| GP01 | -1.823 | -3.404 |
| GP02 | -0.671 | -2.752 |
| GP0c | -1.049 | -1.597 |
| NOD | -0.513 | -1.995 |
| NZO | -0.591 | -5.358 |
| PWK | 0.389 | -5.836 |
| H37Rv_KO_CtpC | 0.374 | -2.684 |
| H37Rv_KO_CtpD | 0.84 | -2.791 |
| H37Rv_KO_Rv1272 | -1.286 | -1.864 |
| H37Rv_KO_SugABC | 0.85 | -1.092 |
| H37Rv_KO_MbtN | -1.061 | 0.118 |
| Trans05 | 1.479 | -1.933 |
| macrophage_unactivated | 0.407 | -0.079 |
| IL1 | 0.593 | 1.35 |
| Rapamycin | -0.141 | -0.037 |
| Tcell | -0.111 | -0.841 |
| GMCSF | -0.409 | 2.094 |
| IFNab | -0.907 | 1.321 |
| IFNg | 0.454 | -1.109 |
| IFNg_GMCSF1 | 0.138 | -0.628 |
| Rv1432_day32 | 0.06 | -2.926 |
| Rv1565c_day32 | 0.39 | -3.852 |
| secA2_input | 0.055 | -0.211 |
| delta_Rv3594 | -0.22 | 0.101 |
| delta_Rv3717 | -1.24 | -0.448 |
| delta_Rv3811 | -0.164 | -0.094 |
| delta_Rv0954 | 0.222 | -1.009 |
| PonA1 | 0.548 | -1.103 |
| EccD1_KO | 0.467 | 0.135 |
| EspI_KO | 1.597 | 0.342 |
| PE35_KO | 0.753 | -0.502 |
| PPE68_KO | 1.021 | -0.618 |
| glycerol2 | 1.994 | 2.046 |
| lignocerate | 0.659 | 0.645 |
| oleate | 1.273 | 0.305 |
| phosphatidylcholine | 1.513 | 1.689 |
| acetate | -0.416 | -0.362 |
| glucAc | -1.034 | -0.715 |
| Rv0950ko | -0.621 | 0.326 |
| Rv1096ko | -0.739 | -0.199 |
| Rv3684ko | -0.383 | 0.174 |
| delta_otsA_trehalose | 0.586 | -0.88 |