Top 10 genes with highest correlation to Rv2334/cysK1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2335/cysE | (cc=0.8197) | info on Rv2335/cysE |
| Rv2581c/- | (cc=0.6358) | info on Rv2581c/- |
| Rv0554/bpoC | (cc=0.5477) | info on Rv0554/bpoC |
| Rv2795c/- | (cc=0.535) | info on Rv2795c/- |
| Rv1286/cysN | (cc=0.5036) | info on Rv1286/cysN |
| Rv3412/- | (cc=0.4998) | info on Rv3412/- |
| Rv3855/ethR | (cc=0.4963) | info on Rv3855/ethR |
| Rv0904c/accD3 | (cc=0.4927) | info on Rv0904c/accD3 |
| Rv3262/fbiB | (cc=0.484) | info on Rv3262/fbiB |
| Rv1308/atpA | (cc=0.4791) | info on Rv1308/atpA |
Correlation of Rv2334/cysK1 with Rv2335/cysE
Normalized LFCs for Rv2334/cysK1:
(description and provenance of datasets)
| Rv2334/cysK1 | Rv2335/cysE | |
| Fe_supp_jason_reseq | 2.437 | 3.268 |
| low_pH_jason_reseq | 5.069 | 3.885 |
| NO_jason_reseq | 1.089 | -1.935 |
| B6_jason_reseq | 0.357 | 1.467 |
| MHCII_jason_reseq | -0.257 | -0.842 |
| Isoniazid02 | 3.403 | 2.714 |
| Rifampicin4 | 0.634 | 0.523 |
| Ethambutol3 | 0.285 | 1.018 |
| Meropenem3 | -0.335 | 0.0 |
| Vancomycin16 | 0.809 | 1.73 |
| Rv2680_day32 | 0.0 | 0.0 |
| H37Rv_KO_MarP | 1.666 | 1.274 |
| hypoxia_3wks | -1.284 | -1.36 |
| hypoxia_6wks | 0.378 | -0.518 |
| glycerol | 2.455 | 0.0 |
| cholesterol | 1.761 | 2.618 |
| AJ | 0.232 | 1.324 |
| Bibs02 | 0.0 | -0.183 |
| Bibs02c | 0.0 | -0.209 |
| BL6 | 0.53 | 1.125 |
| BL6a | 1.435 | 1.527 |
| BXD01 | 2.245 | 2.557 |
| BXD010 | 1.115 | 1.915 |
| BXD011 | 0.626 | 1.615 |
| BXD03 | 1.351 | 1.675 |
| BXD04 | 1.184 | 2.008 |
| BXD05 | 1.109 | 1.154 |
| BXD06 | 1.485 | 2.457 |
| BXD07 | 0.768 | 1.675 |
| BXD08 | 2.419 | 1.394 |
| BXD09 | 0.863 | 1.146 |
| CAST | 3.337 | 4.201 |
| CCcont | 1.492 | 1.565 |
| DS01 | 0.45 | 0.216 |
| DS02 | 0.217 | 0.704 |
| DS04 | 0.37 | 0.0 |
| DS0c | 0.0 | -0.217 |
| GP01 | 0.0 | -0.099 |
| GP02 | 0.0 | -0.083 |
| GP0c | 0.0 | -0.13 |
| NOD | 1.507 | 1.282 |
| NZO | 0.0 | 1.537 |
| PWK | 0.196 | 2.646 |
| H37Rv_KO_CtpC | 0.0 | 0.148 |
| H37Rv_KO_CtpD | 0.703 | 0.723 |
| H37Rv_KO_Rv1272 | 0.269 | 1.574 |
| H37Rv_KO_SugABC | 0.664 | -0.099 |
| H37Rv_KO_MbtN | 0.283 | 0.404 |
| Trans05 | 0.803 | 0.947 |
| macrophage_unactivated | 0.398 | -1.196 |
| IL1 | -0.409 | -1.124 |
| Rapamycin | -0.424 | 0.328 |
| Tcell | -0.45 | -0.785 |
| GMCSF | 0.0 | -1.001 |
| IFNab | -0.417 | -0.348 |
| IFNg | -0.369 | -1.013 |
| IFNg_GMCSF1 | 0.0 | -0.361 |
| Rv1432_day32 | -0.18 | 0.611 |
| Rv1565c_day32 | 1.507 | 2.631 |
| secA2_input | -1.315 | -1.296 |
| delta_Rv3594 | -2.522 | -2.348 |
| delta_Rv3717 | -2.896 | -3.335 |
| delta_Rv3811 | -2.767 | -3.324 |
| delta_Rv0954 | -0.716 | -0.667 |
| PonA1 | 0.864 | 0.537 |
| EccD1_KO | 0.526 | 1.694 |
| EspI_KO | 2.053 | 0.419 |
| PE35_KO | 0.683 | 2.269 |
| PPE68_KO | 1.59 | 2.188 |
| glycerol2 | -1.208 | -1.822 |
| lignocerate | -0.756 | -1.877 |
| oleate | -1.418 | -2.185 |
| phosphatidylcholine | -1.401 | -2.35 |
| acetate | 0.72 | 0.708 |
| glucAc | 0.272 | -0.199 |
| Rv0950ko | 1.999 | 1.143 |
| Rv1096ko | 2.925 | 1.541 |
| Rv3684ko | 2.044 | 2.577 |
| delta_otsA_trehalose | 0.854 | 0.468 |