Top 10 genes with highest correlation to Rv2301/cut2:
update plot | correlation | link to info on gene |
---|---|---|
Rv1407/fmu | (cc=0.5437) | info on Rv1407/fmu |
Rv3322c/- | (cc=0.4415) | info on Rv3322c/- |
Rv2114/- | (cc=0.3909) | info on Rv2114/- |
Rv1961/- | (cc=0.3905) | info on Rv1961/- |
Rv1846c/blaI | (cc=0.3847) | info on Rv1846c/blaI |
Rv0038/- | (cc=0.3773) | info on Rv0038/- |
Rv1999c/- | (cc=0.3708) | info on Rv1999c/- |
Rv0969/ctpV | (cc=0.3651) | info on Rv0969/ctpV |
Rv0571c/- | (cc=0.3643) | info on Rv0571c/- |
Rv1527c/pks5 | (cc=0.3626) | info on Rv1527c/pks5 |
Correlation of Rv2301/cut2 with Rv0969/ctpV
Normalized LFCs for Rv2301/cut2:
(description and provenance of datasets)
Rv2301/cut2 | Rv0969/ctpV | |
Fe_supp_jason_reseq | -0.688 | -0.535 |
low_pH_jason_reseq | -1.845 | -1.522 |
NO_jason_reseq | 0.207 | -0.362 |
B6_jason_reseq | -0.21 | -0.715 |
MHCII_jason_reseq | -0.05 | -0.391 |
Isoniazid02 | -0.048 | 0.397 |
Rifampicin4 | 0.745 | -0.233 |
Ethambutol3 | -0.5 | 0.581 |
Meropenem3 | -0.117 | 0.492 |
Vancomycin16 | 0.271 | -0.324 |
Rv2680_day32 | -0.932 | -0.154 |
H37Rv_KO_MarP | 0.278 | 0.26 |
hypoxia_3wks | -0.355 | -0.211 |
hypoxia_6wks | 0.246 | 0.127 |
glycerol | -0.259 | 0.291 |
cholesterol | 0.628 | 0.358 |
AJ | -0.082 | 0.44 |
Bibs02 | 0.171 | 0.648 |
Bibs02c | 0.803 | 0.576 |
BL6 | -0.821 | -0.084 |
BL6a | 0.098 | 0.264 |
BXD01 | -0.636 | -0.556 |
BXD010 | -0.412 | -0.288 |
BXD011 | -0.344 | -0.24 |
BXD03 | -0.247 | -0.743 |
BXD04 | -0.328 | -0.305 |
BXD05 | -0.021 | 0.268 |
BXD06 | -0.532 | -0.558 |
BXD07 | -1.025 | -0.301 |
BXD08 | -1.213 | -0.299 |
BXD09 | -0.331 | -0.216 |
CAST | -0.971 | -0.534 |
CCcont | -0.078 | -0.391 |
DS01 | 0.796 | 0.303 |
DS02 | -0.104 | 0.15 |
DS04 | -0.093 | 0.611 |
DS0c | -0.416 | -0.039 |
GP01 | 0.555 | 0.358 |
GP02 | 0.101 | -0.205 |
GP0c | 0.39 | -0.063 |
NOD | -0.452 | -0.109 |
NZO | 0.37 | 0.046 |
PWK | -0.142 | -0.483 |
H37Rv_KO_CtpC | -1.422 | 0.139 |
H37Rv_KO_CtpD | -0.505 | -0.802 |
H37Rv_KO_Rv1272 | -0.251 | 0.057 |
H37Rv_KO_SugABC | 0.581 | 0.616 |
H37Rv_KO_MbtN | -0.337 | -0.877 |
Trans05 | 1.595 | -0.139 |
macrophage_unactivated | -0.035 | 0.694 |
IL1 | -0.537 | -0.11 |
Rapamycin | -0.104 | 0.11 |
Tcell | -0.228 | 0.059 |
GMCSF | -0.106 | -0.148 |
IFNab | 0.169 | 0.163 |
IFNg | -0.045 | 0.371 |
IFNg_GMCSF1 | -0.371 | 0.616 |
Rv1432_day32 | -0.975 | 0.322 |
Rv1565c_day32 | -0.82 | -0.264 |
secA2_input | 0.283 | 0.892 |
delta_Rv3594 | 0.408 | -0.32 |
delta_Rv3717 | 0.468 | -0.328 |
delta_Rv3811 | 0.636 | 0.318 |
delta_Rv0954 | 0.531 | 0.143 |
PonA1 | -0.432 | 0.324 |
EccD1_KO | -0.092 | 0.382 |
EspI_KO | -0.197 | 0.24 |
PE35_KO | 0.096 | 0.292 |
PPE68_KO | -0.163 | 0.218 |
glycerol2 | 0.199 | 0.15 |
lignocerate | 0.084 | 0.144 |
oleate | -0.179 | 0.119 |
phosphatidylcholine | -0.102 | 0.333 |
acetate | 0.451 | 0.08 |
glucAc | 0.16 | 0.157 |
Rv0950ko | 0.603 | 0.223 |
Rv1096ko | -0.103 | 1.077 |
Rv3684ko | 0.252 | 0.609 |
delta_otsA_trehalose | 0.003 | 2.032 |