Top 10 genes with highest correlation to Rv2271/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0235c/- | (cc=0.4109) | info on Rv0235c/- |
| Rv3446c/- | (cc=0.3877) | info on Rv3446c/- |
| Rv1581c/- | (cc=0.3805) | info on Rv1581c/- |
| Rv1049/- | (cc=0.3716) | info on Rv1049/- |
| Rv0541c/- | (cc=0.3631) | info on Rv0541c/- |
| Rv3181c/- | (cc=0.361) | info on Rv3181c/- |
| Rv2927c/- | (cc=0.3578) | info on Rv2927c/- |
| Rv1214c/PE14 | (cc=0.3555) | info on Rv1214c/PE14 |
| Rv0349/- | (cc=0.3553) | info on Rv0349/- |
| Rv1217c/- | (cc=0.3542) | info on Rv1217c/- |
Correlation of Rv2271/- with Rv3446c/-
Normalized LFCs for Rv2271/-:
(description and provenance of datasets)
| Rv2271/- | Rv3446c/- | |
| Fe_supp_jason_reseq | -1.872 | -0.393 |
| low_pH_jason_reseq | 1.482 | 3.503 |
| NO_jason_reseq | 0.507 | -0.412 |
| B6_jason_reseq | -0.965 | -0.747 |
| MHCII_jason_reseq | -2.651 | -0.257 |
| Isoniazid02 | 0.306 | 0.081 |
| Rifampicin4 | -0.712 | -0.157 |
| Ethambutol3 | -0.089 | 0.0 |
| Meropenem3 | -0.399 | 1.33 |
| Vancomycin16 | 0.621 | 0.292 |
| Rv2680_day32 | 0.704 | -0.803 |
| H37Rv_KO_MarP | -0.312 | 0.45 |
| hypoxia_3wks | -0.132 | -0.538 |
| hypoxia_6wks | -0.898 | -0.816 |
| glycerol | -0.929 | -0.123 |
| cholesterol | -1.024 | -0.222 |
| AJ | 0.121 | -0.771 |
| Bibs02 | -1.293 | -0.066 |
| Bibs02c | 0.596 | 0.488 |
| BL6 | -0.682 | 0.014 |
| BL6a | 0.397 | 0.023 |
| BXD01 | 0.567 | -0.063 |
| BXD010 | 0.022 | -0.145 |
| BXD011 | -0.13 | -0.445 |
| BXD03 | 1.009 | 1.195 |
| BXD04 | -0.022 | -0.06 |
| BXD05 | 0.28 | -0.049 |
| BXD06 | -0.441 | -0.048 |
| BXD07 | 0.036 | 0.448 |
| BXD08 | -0.024 | -0.081 |
| BXD09 | 0.282 | -0.034 |
| CAST | 0.594 | -0.385 |
| CCcont | 0.321 | 0.0 |
| DS01 | -0.459 | 0.188 |
| DS02 | -1.355 | -0.189 |
| DS04 | 1.029 | 0.112 |
| DS0c | -0.468 | -1.193 |
| GP01 | 0.928 | 0.0 |
| GP02 | -0.696 | -0.708 |
| GP0c | -0.185 | 0.398 |
| NOD | 1.695 | 0.155 |
| NZO | -1.243 | -0.199 |
| PWK | 0.0 | 0.401 |
| H37Rv_KO_CtpC | 0.808 | 0.165 |
| H37Rv_KO_CtpD | 0.491 | 0.432 |
| H37Rv_KO_Rv1272 | -1.18 | -0.016 |
| H37Rv_KO_SugABC | 0.673 | -1.114 |
| H37Rv_KO_MbtN | -0.992 | -0.202 |
| Trans05 | -1.378 | -1.381 |
| macrophage_unactivated | 2.459 | -0.054 |
| IL1 | -0.801 | -1.916 |
| Rapamycin | -1.906 | -1.823 |
| Tcell | -0.078 | 0.72 |
| GMCSF | 0.805 | -1.149 |
| IFNab | -0.65 | -1.796 |
| IFNg | 0.094 | -1.384 |
| IFNg_GMCSF1 | -0.424 | -1.904 |
| Rv1432_day32 | -0.794 | 0.072 |
| Rv1565c_day32 | 0.63 | 0.711 |
| secA2_input | -0.322 | -0.7 |
| delta_Rv3594 | 1.663 | 0.133 |
| delta_Rv3717 | 1.505 | 0.312 |
| delta_Rv3811 | 2.738 | 0.906 |
| delta_Rv0954 | 0.929 | 0.49 |
| PonA1 | 0.165 | 0.944 |
| EccD1_KO | -0.71 | 0.352 |
| EspI_KO | -1.109 | -0.687 |
| PE35_KO | -0.21 | -0.948 |
| PPE68_KO | -0.032 | -0.669 |
| glycerol2 | 0.142 | 0.057 |
| lignocerate | 0.307 | 0.362 |
| oleate | 0.18 | -0.06 |
| phosphatidylcholine | 0.104 | 0.14 |
| acetate | -0.13 | 0.229 |
| glucAc | 0.244 | 0.289 |
| Rv0950ko | 0.317 | 0.431 |
| Rv1096ko | -0.431 | 0.727 |
| Rv3684ko | -0.989 | 0.684 |
| delta_otsA_trehalose | -0.578 | -1.129 |