Top 10 genes with highest correlation to Rv2262c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0940c/- | (cc=0.4887) | info on Rv0940c/- |
| Rv1664/pks9 | (cc=0.4783) | info on Rv1664/pks9 |
| Rv0397A/- | (cc=0.4751) | info on Rv0397A/- |
| Rv1947/- | (cc=0.4718) | info on Rv1947/- |
| Rv1726/- | (cc=0.469) | info on Rv1726/- |
| Rv3664c/dppC | (cc=0.4551) | info on Rv3664c/dppC |
| Rv3150/nuoF | (cc=0.4482) | info on Rv3150/nuoF |
| Rv3397c/phyA | (cc=0.4447) | info on Rv3397c/phyA |
| Rv3116/moeB2 | (cc=0.44) | info on Rv3116/moeB2 |
| Rv2345/- | (cc=0.4363) | info on Rv2345/- |
Correlation of Rv2262c/- with Rv1947/-
Normalized LFCs for Rv2262c/-:
(description and provenance of datasets)
| Rv2262c/- | Rv1947/- | |
| Fe_supp_jason_reseq | -0.979 | -0.837 |
| low_pH_jason_reseq | 0.082 | -1.733 |
| NO_jason_reseq | 0.252 | -0.557 |
| B6_jason_reseq | -0.033 | -0.522 |
| MHCII_jason_reseq | -0.1 | -0.579 |
| Isoniazid02 | -1.061 | -3.635 |
| Rifampicin4 | 0.915 | 0.36 |
| Ethambutol3 | -0.904 | -3.496 |
| Meropenem3 | -1.549 | -2.943 |
| Vancomycin16 | -0.517 | -1.727 |
| Rv2680_day32 | -0.793 | -0.791 |
| H37Rv_KO_MarP | 0.172 | -0.776 |
| hypoxia_3wks | 0.439 | 0.239 |
| hypoxia_6wks | -0.146 | -0.182 |
| glycerol | 0.328 | -0.575 |
| cholesterol | -0.804 | -0.088 |
| AJ | 0.061 | 0.37 |
| Bibs02 | -0.221 | 0.156 |
| Bibs02c | -1.356 | 0.406 |
| BL6 | 1.454 | 0.333 |
| BL6a | -0.089 | 0.234 |
| BXD01 | 0.885 | 0.359 |
| BXD010 | 0.554 | 1.362 |
| BXD011 | 0.066 | 0.022 |
| BXD03 | -0.098 | 1.131 |
| BXD04 | 0.461 | 0.618 |
| BXD05 | 0.209 | 0.617 |
| BXD06 | 0.323 | 0.74 |
| BXD07 | 0.591 | 0.49 |
| BXD08 | 0.598 | 0.143 |
| BXD09 | 0.207 | 0.431 |
| CAST | 0.374 | 0.053 |
| CCcont | 0.574 | -0.335 |
| DS01 | 0.14 | -0.267 |
| DS02 | 0.978 | -1.111 |
| DS04 | 0.85 | 0.443 |
| DS0c | 0.555 | 0.506 |
| GP01 | -0.211 | -0.715 |
| GP02 | -0.539 | -1.404 |
| GP0c | -0.41 | 0.842 |
| NOD | -0.735 | -0.623 |
| NZO | -0.605 | -0.998 |
| PWK | -0.296 | -0.301 |
| H37Rv_KO_CtpC | 0.684 | 0.966 |
| H37Rv_KO_CtpD | -0.298 | 0.688 |
| H37Rv_KO_Rv1272 | 0.552 | -0.413 |
| H37Rv_KO_SugABC | -0.301 | 2.349 |
| H37Rv_KO_MbtN | 0.611 | -0.395 |
| Trans05 | 0.788 | 0.558 |
| macrophage_unactivated | 0.193 | 1.004 |
| IL1 | 0.062 | 0.958 |
| Rapamycin | 0.31 | 1.897 |
| Tcell | 0.694 | 0.844 |
| GMCSF | 0.108 | 1.36 |
| IFNab | 0.124 | 2.143 |
| IFNg | -0.35 | 1.451 |
| IFNg_GMCSF1 | 0.031 | 2.046 |
| Rv1432_day32 | -0.147 | -1.632 |
| Rv1565c_day32 | 0.466 | -0.303 |
| secA2_input | -0.631 | 0.011 |
| delta_Rv3594 | -0.281 | 0.076 |
| delta_Rv3717 | -0.257 | 0.143 |
| delta_Rv3811 | 0.37 | 0.718 |
| delta_Rv0954 | -0.048 | -1.416 |
| PonA1 | -0.756 | 0.048 |
| EccD1_KO | -0.187 | -0.506 |
| EspI_KO | 0.451 | -0.074 |
| PE35_KO | -0.055 | 0.65 |
| PPE68_KO | -0.598 | 0.179 |
| glycerol2 | 0.165 | 0.063 |
| lignocerate | -0.212 | -0.9 |
| oleate | 0.242 | 1.014 |
| phosphatidylcholine | 0.261 | -0.123 |
| acetate | -0.332 | -1.401 |
| glucAc | -0.638 | -2.763 |
| Rv0950ko | -0.317 | -0.615 |
| Rv1096ko | 0.422 | -2.069 |
| Rv3684ko | -0.383 | -2.168 |
| delta_otsA_trehalose | 1.545 | 3.544 |