Top 10 genes with highest correlation to Rv2252/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0697/- | (cc=0.4786) | info on Rv0697/- |
| Rv2403c/lppR | (cc=0.4473) | info on Rv2403c/lppR |
| Rv2620c/- | (cc=0.392) | info on Rv2620c/- |
| Rv3069/- | (cc=0.3882) | info on Rv3069/- |
| Rv2740/ephG | (cc=0.3881) | info on Rv2740/ephG |
| Rv3215/entC | (cc=0.3845) | info on Rv3215/entC |
| Rv2455c/- | (cc=0.3739) | info on Rv2455c/- |
| Rv2454c/- | (cc=0.3708) | info on Rv2454c/- |
| Rv2461c/clpP1 | (cc=0.3563) | info on Rv2461c/clpP1 |
| Rv2043c/pncA | (cc=0.3563) | info on Rv2043c/pncA |
Correlation of Rv2252/- with Rv0697/-
Normalized LFCs for Rv2252/-:
(description and provenance of datasets)
| Rv2252/- | Rv0697/- | |
| Fe_supp_jason_reseq | 0.268 | 0.611 |
| low_pH_jason_reseq | 0.371 | 1.673 |
| NO_jason_reseq | 0.446 | 0.788 |
| B6_jason_reseq | 0.777 | 1.63 |
| MHCII_jason_reseq | 1.625 | 1.687 |
| Isoniazid02 | 0.787 | -1.104 |
| Rifampicin4 | 0.0 | -1.765 |
| Ethambutol3 | 0.0 | -1.063 |
| Meropenem3 | -0.254 | -0.662 |
| Vancomycin16 | 0.0 | -1.73 |
| Rv2680_day32 | -0.131 | -0.642 |
| H37Rv_KO_MarP | -0.43 | 0.35 |
| hypoxia_3wks | 0.12 | 0.459 |
| hypoxia_6wks | 0.063 | -0.549 |
| glycerol | 0.0 | -0.291 |
| cholesterol | -0.159 | -0.663 |
| AJ | -0.541 | -2.301 |
| Bibs02 | 0.502 | -0.744 |
| Bibs02c | -0.23 | 0.664 |
| BL6 | 0.217 | -1.479 |
| BL6a | 0.377 | 0.628 |
| BXD01 | 0.054 | -0.188 |
| BXD010 | -1.039 | -0.727 |
| BXD011 | 1.085 | -0.136 |
| BXD03 | -0.214 | -0.934 |
| BXD04 | 0.051 | -0.632 |
| BXD05 | 0.302 | -0.094 |
| BXD06 | -0.211 | -0.479 |
| BXD07 | 0.38 | -0.497 |
| BXD08 | -0.177 | 0.087 |
| BXD09 | -0.091 | -0.719 |
| CAST | -0.661 | -0.616 |
| CCcont | -0.199 | -1.765 |
| DS01 | -0.315 | -0.847 |
| DS02 | 0.377 | -0.314 |
| DS04 | -0.453 | -0.066 |
| DS0c | -1.397 | -1.362 |
| GP01 | 0.021 | -0.142 |
| GP02 | 1.364 | -0.756 |
| GP0c | -0.337 | -0.09 |
| NOD | -1.279 | -0.701 |
| NZO | 0.448 | -2.16 |
| PWK | -1.117 | 0.249 |
| H37Rv_KO_CtpC | -0.758 | -1.759 |
| H37Rv_KO_CtpD | -0.027 | 0.083 |
| H37Rv_KO_Rv1272 | 0.364 | -0.721 |
| H37Rv_KO_SugABC | -1.477 | -0.9 |
| H37Rv_KO_MbtN | -0.791 | -1.116 |
| Trans05 | -0.411 | -0.044 |
| macrophage_unactivated | 1.105 | 1.708 |
| IL1 | -0.11 | 1.032 |
| Rapamycin | 0.424 | 1.068 |
| Tcell | 0.45 | 0.411 |
| GMCSF | 1.545 | 1.545 |
| IFNab | 0.514 | 0.729 |
| IFNg | 1.689 | 0.93 |
| IFNg_GMCSF1 | 1.191 | 1.555 |
| Rv1432_day32 | -0.445 | -0.974 |
| Rv1565c_day32 | 0.131 | -0.186 |
| secA2_input | -2.311 | -2.325 |
| delta_Rv3594 | 1.037 | 0.295 |
| delta_Rv3717 | 0.331 | 0.457 |
| delta_Rv3811 | -0.33 | 0.416 |
| delta_Rv0954 | 0.249 | 0.57 |
| PonA1 | 0.691 | 1.213 |
| EccD1_KO | 0.997 | -1.194 |
| EspI_KO | -0.588 | -0.154 |
| PE35_KO | 0.648 | -1.263 |
| PPE68_KO | 0.841 | -0.944 |
| glycerol2 | 0.05 | 0.734 |
| lignocerate | 0.357 | -0.659 |
| oleate | 0.147 | 1.07 |
| phosphatidylcholine | 0.193 | 0.347 |
| acetate | 0.173 | -0.499 |
| glucAc | 0.037 | -0.701 |
| Rv0950ko | 0.0 | 0.534 |
| Rv1096ko | 0.112 | 0.697 |
| Rv3684ko | -0.511 | -0.21 |
| delta_otsA_trehalose | 0.818 | 1.179 |