Top 10 genes with highest correlation to Rv2213/pepB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2462c/tig | (cc=0.4632) | info on Rv2462c/tig |
| Rv0056/rplI | (cc=0.4474) | info on Rv0056/rplI |
| Rv0866/moaE2 | (cc=0.4364) | info on Rv0866/moaE2 |
| Rv1982A/vapB36 | (cc=0.4236) | info on Rv1982A/vapB36 |
| Rv0946c/pgi | (cc=0.4212) | info on Rv0946c/pgi |
| Rv3228/- | (cc=0.4013) | info on Rv3228/- |
| Rv3036c/TB22.2 | (cc=0.3996) | info on Rv3036c/TB22.2 |
| Rv1003/- | (cc=0.3974) | info on Rv1003/- |
| Rv0191/- | (cc=0.3898) | info on Rv0191/- |
| Rv2690c/- | (cc=0.3709) | info on Rv2690c/- |
Correlation of Rv2213/pepB with Rv2462c/tig
Normalized LFCs for Rv2213/pepB:
(description and provenance of datasets)
| Rv2213/pepB | Rv2462c/tig | |
| Fe_supp_jason_reseq | 1.1 | -0.257 |
| low_pH_jason_reseq | -0.507 | -2.423 |
| NO_jason_reseq | -0.491 | -1.964 |
| B6_jason_reseq | 0.241 | -0.958 |
| MHCII_jason_reseq | -0.733 | -1.57 |
| Isoniazid02 | -0.294 | -1.573 |
| Rifampicin4 | -0.403 | -1.462 |
| Ethambutol3 | 0.451 | 0.643 |
| Meropenem3 | -0.6 | -2.059 |
| Vancomycin16 | 4.149 | -0.499 |
| Rv2680_day32 | -0.536 | -1.318 |
| H37Rv_KO_MarP | 1.003 | -1.912 |
| hypoxia_3wks | -0.403 | -0.57 |
| hypoxia_6wks | -0.18 | 0.138 |
| glycerol | 1.546 | 2.124 |
| cholesterol | 1.586 | -0.585 |
| AJ | 0.894 | -0.745 |
| Bibs02 | 0.125 | -2.064 |
| Bibs02c | -0.649 | -1.173 |
| BL6 | 0.786 | 0.648 |
| BL6a | 0.705 | 0.634 |
| BXD01 | 0.266 | -0.317 |
| BXD010 | 0.613 | 1.319 |
| BXD011 | 0.73 | 0.497 |
| BXD03 | 0.818 | 1.613 |
| BXD04 | -0.018 | 0.323 |
| BXD05 | 1.17 | 0.791 |
| BXD06 | 1.004 | 1.345 |
| BXD07 | 1.453 | 0.683 |
| BXD08 | 0.551 | -0.109 |
| BXD09 | 0.32 | 0.761 |
| CAST | -0.204 | 0.175 |
| CCcont | 0.619 | 1.351 |
| DS01 | -1.121 | -2.957 |
| DS02 | -1.287 | -2.105 |
| DS04 | -0.877 | -0.899 |
| DS0c | -0.673 | -2.577 |
| GP01 | -0.609 | 0.075 |
| GP02 | -0.756 | 0.078 |
| GP0c | -0.479 | 0.298 |
| NOD | -0.571 | 0.0 |
| NZO | -0.27 | -0.25 |
| PWK | 0.027 | 1.218 |
| H37Rv_KO_CtpC | 0.89 | 0.0 |
| H37Rv_KO_CtpD | -0.573 | 0.442 |
| H37Rv_KO_Rv1272 | 0.611 | 0.368 |
| H37Rv_KO_SugABC | 0.466 | 0.756 |
| H37Rv_KO_MbtN | 1.015 | 3.253 |
| Trans05 | 1.236 | 0.661 |
| macrophage_unactivated | 0.483 | -0.694 |
| IL1 | 0.131 | -2.05 |
| Rapamycin | 0.396 | -1.537 |
| Tcell | -0.117 | -1.023 |
| GMCSF | -0.372 | 0.0 |
| IFNab | 0.677 | 1.542 |
| IFNg | 0.388 | 0.163 |
| IFNg_GMCSF1 | 0.962 | 1.427 |
| Rv1432_day32 | 0.442 | -1.082 |
| Rv1565c_day32 | -0.376 | 0.152 |
| secA2_input | 1.149 | 2.192 |
| delta_Rv3594 | 2.002 | 2.923 |
| delta_Rv3717 | 1.558 | 3.498 |
| delta_Rv3811 | 1.121 | 2.692 |
| delta_Rv0954 | 0.957 | 1.972 |
| PonA1 | -0.944 | -0.927 |
| EccD1_KO | -0.161 | -0.072 |
| EspI_KO | 0.55 | -1.469 |
| PE35_KO | 0.592 | -0.099 |
| PPE68_KO | 0.154 | -0.854 |
| glycerol2 | -0.228 | 0.661 |
| lignocerate | 0.0 | -0.603 |
| oleate | -0.275 | -1.001 |
| phosphatidylcholine | 0.317 | -0.604 |
| acetate | -0.374 | -0.331 |
| glucAc | -0.577 | -0.049 |
| Rv0950ko | -0.371 | -0.286 |
| Rv1096ko | -0.335 | -0.069 |
| Rv3684ko | -1.097 | 1.444 |
| delta_otsA_trehalose | 2.06 | -0.522 |