Top 10 genes with highest correlation to Rv2206/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1100/- | (cc=0.5876) | info on Rv1100/- |
| Rv2444c/rne | (cc=0.559) | info on Rv2444c/rne |
| Rv3813c/- | (cc=0.5393) | info on Rv3813c/- |
| Rv1278/- | (cc=0.5357) | info on Rv1278/- |
| Rv2374c/hrcA | (cc=0.5176) | info on Rv2374c/hrcA |
| Rv1072/- | (cc=0.516) | info on Rv1072/- |
| Rv2840c/- | (cc=0.5099) | info on Rv2840c/- |
| Rv0929/pstC2 | (cc=0.5018) | info on Rv0929/pstC2 |
| Rv0820/phoT | (cc=0.4989) | info on Rv0820/phoT |
| Rv2567/- | (cc=0.4977) | info on Rv2567/- |
Correlation of Rv2206/- with Rv2840c/-
Normalized LFCs for Rv2206/-:
(description and provenance of datasets)
| Rv2206/- | Rv2840c/- | |
| Fe_supp_jason_reseq | 0.316 | -2.69 |
| low_pH_jason_reseq | 5.101 | 1.961 |
| NO_jason_reseq | 0.079 | 0.375 |
| B6_jason_reseq | -0.829 | -1.117 |
| MHCII_jason_reseq | -0.633 | -1.172 |
| Isoniazid02 | -0.563 | 1.596 |
| Rifampicin4 | -0.49 | -0.393 |
| Ethambutol3 | 2.212 | 0.726 |
| Meropenem3 | 0.098 | -0.386 |
| Vancomycin16 | -0.743 | 0.289 |
| Rv2680_day32 | -2.221 | -2.416 |
| H37Rv_KO_MarP | -1.411 | 0.275 |
| hypoxia_3wks | -1.83 | -1.172 |
| hypoxia_6wks | -0.837 | -0.687 |
| glycerol | 2.607 | 1.091 |
| cholesterol | -1.387 | 0.233 |
| AJ | -0.934 | -1.308 |
| Bibs02 | 1.856 | 0.346 |
| Bibs02c | 0.324 | 1.616 |
| BL6 | 0.88 | 1.96 |
| BL6a | 1.555 | 1.402 |
| BXD01 | 1.236 | 2.453 |
| BXD010 | 0.726 | -0.028 |
| BXD011 | 1.293 | 0.493 |
| BXD03 | 1.661 | 0.043 |
| BXD04 | 1.582 | 1.941 |
| BXD05 | 2.23 | 0.191 |
| BXD06 | 0.82 | 1.974 |
| BXD07 | 0.057 | 1.995 |
| BXD08 | 1.018 | 1.868 |
| BXD09 | 1.404 | 1.056 |
| CAST | -1.074 | 0.327 |
| CCcont | 2.354 | 0.91 |
| DS01 | 2.202 | 1.685 |
| DS02 | 1.873 | 1.391 |
| DS04 | 2.228 | 1.672 |
| DS0c | 0.63 | 0.951 |
| GP01 | 1.519 | 0.112 |
| GP02 | 0.387 | 0.335 |
| GP0c | 1.725 | 0.624 |
| NOD | -0.905 | 1.11 |
| NZO | -0.931 | -0.182 |
| PWK | 1.54 | -0.737 |
| H37Rv_KO_CtpC | 2.23 | 0.035 |
| H37Rv_KO_CtpD | -0.11 | -0.418 |
| H37Rv_KO_Rv1272 | 0.317 | 0.132 |
| H37Rv_KO_SugABC | 0.889 | 0.701 |
| H37Rv_KO_MbtN | 2.267 | 1.21 |
| Trans05 | 0.0 | -0.284 |
| macrophage_unactivated | -2.389 | 0.107 |
| IL1 | -3.426 | -0.828 |
| Rapamycin | -2.98 | -1.706 |
| Tcell | -1.58 | 0.326 |
| GMCSF | -0.586 | 0.43 |
| IFNab | -0.671 | -0.801 |
| IFNg | -1.644 | -0.39 |
| IFNg_GMCSF1 | -1.398 | 0.248 |
| Rv1432_day32 | -1.106 | -0.477 |
| Rv1565c_day32 | -2.486 | -0.741 |
| secA2_input | -0.376 | 0.545 |
| delta_Rv3594 | -0.616 | -1.704 |
| delta_Rv3717 | 0.0 | -1.742 |
| delta_Rv3811 | 0.054 | -2.412 |
| delta_Rv0954 | -0.521 | -1.889 |
| PonA1 | -0.522 | -2.125 |
| EccD1_KO | 0.934 | 1.977 |
| EspI_KO | 0.205 | 1.771 |
| PE35_KO | -0.108 | 1.336 |
| PPE68_KO | 0.659 | 2.339 |
| glycerol2 | 0.0 | -1.129 |
| lignocerate | -0.462 | -0.24 |
| oleate | -0.537 | -0.797 |
| phosphatidylcholine | -0.338 | -1.368 |
| acetate | -0.191 | -0.191 |
| glucAc | 0.31 | -0.453 |
| Rv0950ko | 0.238 | -0.112 |
| Rv1096ko | 0.884 | -1.04 |
| Rv3684ko | -0.203 | -0.305 |
| delta_otsA_trehalose | 0.226 | 0.887 |