Top 10 genes with highest correlation to Rv2206/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv1100/- | (cc=0.5876) | info on Rv1100/- |
Rv2444c/rne | (cc=0.559) | info on Rv2444c/rne |
Rv3813c/- | (cc=0.5393) | info on Rv3813c/- |
Rv1278/- | (cc=0.5357) | info on Rv1278/- |
Rv2374c/hrcA | (cc=0.5176) | info on Rv2374c/hrcA |
Rv1072/- | (cc=0.516) | info on Rv1072/- |
Rv2840c/- | (cc=0.5099) | info on Rv2840c/- |
Rv0929/pstC2 | (cc=0.5018) | info on Rv0929/pstC2 |
Rv0820/phoT | (cc=0.4989) | info on Rv0820/phoT |
Rv2567/- | (cc=0.4977) | info on Rv2567/- |
Correlation of Rv2206/- with Rv1072/-
Normalized LFCs for Rv2206/-:
(description and provenance of datasets)
Rv2206/- | Rv1072/- | |
Fe_supp_jason_reseq | 0.316 | 3.452 |
low_pH_jason_reseq | 5.101 | 0.709 |
NO_jason_reseq | 0.079 | -0.205 |
B6_jason_reseq | -0.829 | 1.58 |
MHCII_jason_reseq | -0.633 | 0.0 |
Isoniazid02 | -0.563 | -2.007 |
Rifampicin4 | -0.49 | -0.653 |
Ethambutol3 | 2.212 | 3.263 |
Meropenem3 | 0.098 | 0.586 |
Vancomycin16 | -0.743 | -0.727 |
Rv2680_day32 | -2.221 | -0.803 |
H37Rv_KO_MarP | -1.411 | -2.718 |
hypoxia_3wks | -1.83 | 0.0 |
hypoxia_6wks | -0.837 | 1.451 |
glycerol | 2.607 | 0.089 |
cholesterol | -1.387 | -1.261 |
AJ | -0.934 | 0.948 |
Bibs02 | 1.856 | 0.747 |
Bibs02c | 0.324 | 0.653 |
BL6 | 0.88 | 2.081 |
BL6a | 1.555 | 1.728 |
BXD01 | 1.236 | 3.146 |
BXD010 | 0.726 | 2.277 |
BXD011 | 1.293 | 3.036 |
BXD03 | 1.661 | 2.899 |
BXD04 | 1.582 | 5.696 |
BXD05 | 2.23 | 2.5 |
BXD06 | 0.82 | 2.909 |
BXD07 | 0.057 | 2.518 |
BXD08 | 1.018 | 3.668 |
BXD09 | 1.404 | 1.736 |
CAST | -1.074 | 4.513 |
CCcont | 2.354 | 2.429 |
DS01 | 2.202 | 0.965 |
DS02 | 1.873 | 0.821 |
DS04 | 2.228 | 0.793 |
DS0c | 0.63 | 0.748 |
GP01 | 1.519 | 0.0 |
GP02 | 0.387 | -0.166 |
GP0c | 1.725 | -0.26 |
NOD | -0.905 | 1.87 |
NZO | -0.931 | 0.815 |
PWK | 1.54 | 2.865 |
H37Rv_KO_CtpC | 2.23 | 3.557 |
H37Rv_KO_CtpD | -0.11 | 1.054 |
H37Rv_KO_Rv1272 | 0.317 | 1.837 |
H37Rv_KO_SugABC | 0.889 | 1.948 |
H37Rv_KO_MbtN | 2.267 | 2.179 |
Trans05 | 0.0 | 2.15 |
macrophage_unactivated | -2.389 | -1.13 |
IL1 | -3.426 | -1.949 |
Rapamycin | -2.98 | -2.961 |
Tcell | -1.58 | 1.466 |
GMCSF | -0.586 | -1.191 |
IFNab | -0.671 | 0.0 |
IFNg | -1.644 | -1.756 |
IFNg_GMCSF1 | -1.398 | -0.465 |
Rv1432_day32 | -1.106 | -0.887 |
Rv1565c_day32 | -2.486 | 0.401 |
secA2_input | -0.376 | 1.079 |
delta_Rv3594 | -0.616 | -0.846 |
delta_Rv3717 | 0.0 | -2.079 |
delta_Rv3811 | 0.054 | -0.717 |
delta_Rv0954 | -0.521 | -2.135 |
PonA1 | -0.522 | -1.272 |
EccD1_KO | 0.934 | 1.312 |
EspI_KO | 0.205 | 1.041 |
PE35_KO | -0.108 | 0.306 |
PPE68_KO | 0.659 | 0.653 |
glycerol2 | 0.0 | -0.451 |
lignocerate | -0.462 | -0.897 |
oleate | -0.537 | -0.588 |
phosphatidylcholine | -0.338 | -1.207 |
acetate | -0.191 | -0.535 |
glucAc | 0.31 | 0.554 |
Rv0950ko | 0.238 | 0.28 |
Rv1096ko | 0.884 | 2.524 |
Rv3684ko | -0.203 | 2.6 |
delta_otsA_trehalose | 0.226 | -1.013 |