Top 10 genes with highest correlation to Rv2206/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1100/- | (cc=0.5876) | info on Rv1100/- |
| Rv2444c/rne | (cc=0.559) | info on Rv2444c/rne |
| Rv3813c/- | (cc=0.5393) | info on Rv3813c/- |
| Rv1278/- | (cc=0.5357) | info on Rv1278/- |
| Rv2374c/hrcA | (cc=0.5176) | info on Rv2374c/hrcA |
| Rv1072/- | (cc=0.516) | info on Rv1072/- |
| Rv2840c/- | (cc=0.5099) | info on Rv2840c/- |
| Rv0929/pstC2 | (cc=0.5018) | info on Rv0929/pstC2 |
| Rv0820/phoT | (cc=0.4989) | info on Rv0820/phoT |
| Rv2567/- | (cc=0.4977) | info on Rv2567/- |
Correlation of Rv2206/- with Rv1100/-
Normalized LFCs for Rv2206/-:
(description and provenance of datasets)
| Rv2206/- | Rv1100/- | |
| Fe_supp_jason_reseq | 0.316 | 0.071 |
| low_pH_jason_reseq | 5.101 | 4.725 |
| NO_jason_reseq | 0.079 | -0.536 |
| B6_jason_reseq | -0.829 | 0.163 |
| MHCII_jason_reseq | -0.633 | -2.608 |
| Isoniazid02 | -0.563 | -1.924 |
| Rifampicin4 | -0.49 | 1.313 |
| Ethambutol3 | 2.212 | 3.677 |
| Meropenem3 | 0.098 | 0.217 |
| Vancomycin16 | -0.743 | 0.151 |
| Rv2680_day32 | -2.221 | -0.057 |
| H37Rv_KO_MarP | -1.411 | -2.534 |
| hypoxia_3wks | -1.83 | -3.114 |
| hypoxia_6wks | -0.837 | -0.409 |
| glycerol | 2.607 | 0.462 |
| cholesterol | -1.387 | -0.628 |
| AJ | -0.934 | -1.548 |
| Bibs02 | 1.856 | 0.477 |
| Bibs02c | 0.324 | 0.9 |
| BL6 | 0.88 | 1.547 |
| BL6a | 1.555 | 1.314 |
| BXD01 | 1.236 | 2.85 |
| BXD010 | 0.726 | 2.169 |
| BXD011 | 1.293 | 2.573 |
| BXD03 | 1.661 | 1.751 |
| BXD04 | 1.582 | 4.268 |
| BXD05 | 2.23 | 2.301 |
| BXD06 | 0.82 | 3.125 |
| BXD07 | 0.057 | 2.398 |
| BXD08 | 1.018 | 2.205 |
| BXD09 | 1.404 | 2.056 |
| CAST | -1.074 | 1.844 |
| CCcont | 2.354 | 0.927 |
| DS01 | 2.202 | 0.89 |
| DS02 | 1.873 | 1.419 |
| DS04 | 2.228 | 1.029 |
| DS0c | 0.63 | 1.347 |
| GP01 | 1.519 | -0.554 |
| GP02 | 0.387 | -0.086 |
| GP0c | 1.725 | -0.603 |
| NOD | -0.905 | 0.405 |
| NZO | -0.931 | -0.25 |
| PWK | 1.54 | 1.742 |
| H37Rv_KO_CtpC | 2.23 | 3.317 |
| H37Rv_KO_CtpD | -0.11 | 0.942 |
| H37Rv_KO_Rv1272 | 0.317 | -0.791 |
| H37Rv_KO_SugABC | 0.889 | 0.4 |
| H37Rv_KO_MbtN | 2.267 | 1.323 |
| Trans05 | 0.0 | -0.254 |
| macrophage_unactivated | -2.389 | -1.348 |
| IL1 | -3.426 | -0.525 |
| Rapamycin | -2.98 | -1.547 |
| Tcell | -1.58 | 2.545 |
| GMCSF | -0.586 | -0.412 |
| IFNab | -0.671 | -2.304 |
| IFNg | -1.644 | 0.508 |
| IFNg_GMCSF1 | -1.398 | -0.49 |
| Rv1432_day32 | -1.106 | 0.0 |
| Rv1565c_day32 | -2.486 | -0.782 |
| secA2_input | -0.376 | 0.178 |
| delta_Rv3594 | -0.616 | -1.877 |
| delta_Rv3717 | 0.0 | -1.65 |
| delta_Rv3811 | 0.054 | -1.196 |
| delta_Rv0954 | -0.521 | -1.523 |
| PonA1 | -0.522 | -0.463 |
| EccD1_KO | 0.934 | 0.474 |
| EspI_KO | 0.205 | -0.707 |
| PE35_KO | -0.108 | -1.138 |
| PPE68_KO | 0.659 | -1.494 |
| glycerol2 | 0.0 | -3.224 |
| lignocerate | -0.462 | -1.095 |
| oleate | -0.537 | -3.756 |
| phosphatidylcholine | -0.338 | -1.315 |
| acetate | -0.191 | 0.69 |
| glucAc | 0.31 | 0.736 |
| Rv0950ko | 0.238 | -0.075 |
| Rv1096ko | 0.884 | 1.484 |
| Rv3684ko | -0.203 | -0.419 |
| delta_otsA_trehalose | 0.226 | -0.391 |