Top 10 genes with highest correlation to Rv2171/lppM:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3682/ponA2 | (cc=0.794) | info on Rv3682/ponA2 |
| Rv0007/- | (cc=0.7584) | info on Rv0007/- |
| Rv2203/- | (cc=0.7208) | info on Rv2203/- |
| Rv2700/- | (cc=0.6611) | info on Rv2700/- |
| Rv1825/- | (cc=0.6342) | info on Rv1825/- |
| Rv1823/- | (cc=0.633) | info on Rv1823/- |
| Rv0483/lprQ | (cc=0.5947) | info on Rv0483/lprQ |
| Rv1824/- | (cc=0.5926) | info on Rv1824/- |
| Rv1006/- | (cc=0.5706) | info on Rv1006/- |
| Rv2170/- | (cc=0.5652) | info on Rv2170/- |
Correlation of Rv2171/lppM with Rv3682/ponA2
Normalized LFCs for Rv2171/lppM:
(description and provenance of datasets)
| Rv2171/lppM | Rv3682/ponA2 | |
| Fe_supp_jason_reseq | 2.969 | 2.333 |
| low_pH_jason_reseq | 1.103 | 0.862 |
| NO_jason_reseq | -0.651 | 0.735 |
| B6_jason_reseq | -0.178 | -0.246 |
| MHCII_jason_reseq | 1.917 | 0.189 |
| Isoniazid02 | -0.131 | -0.941 |
| Rifampicin4 | -6.0 | -6.0 |
| Ethambutol3 | -0.418 | 0.383 |
| Meropenem3 | -2.504 | -4.704 |
| Vancomycin16 | -4.383 | -6.0 |
| Rv2680_day32 | -0.521 | -1.468 |
| H37Rv_KO_MarP | 3.329 | 2.554 |
| hypoxia_3wks | -1.826 | -3.118 |
| hypoxia_6wks | -3.339 | -2.159 |
| glycerol | 0.328 | 0.054 |
| cholesterol | -0.58 | 0.315 |
| AJ | 0.022 | -1.388 |
| Bibs02 | 0.554 | 0.356 |
| Bibs02c | 1.999 | 0.671 |
| BL6 | -1.778 | -0.809 |
| BL6a | 0.976 | 0.053 |
| BXD01 | -1.761 | -1.496 |
| BXD010 | -2.895 | -1.577 |
| BXD011 | -0.736 | -0.592 |
| BXD03 | -1.74 | -0.875 |
| BXD04 | -2.61 | -1.42 |
| BXD05 | -1.264 | -1.087 |
| BXD06 | -2.913 | -1.533 |
| BXD07 | -1.738 | -1.383 |
| BXD08 | -2.407 | -1.424 |
| BXD09 | -1.385 | -1.614 |
| CAST | -3.192 | -2.644 |
| CCcont | 0.591 | 2.728 |
| DS01 | -0.376 | -1.528 |
| DS02 | -0.931 | -1.301 |
| DS04 | -3.318 | -0.6 |
| DS0c | 0.789 | 1.051 |
| GP01 | -0.743 | 0.527 |
| GP02 | -0.782 | -0.775 |
| GP0c | -1.411 | -0.659 |
| NOD | -1.822 | -1.814 |
| NZO | -0.451 | -1.731 |
| PWK | -3.355 | -2.416 |
| H37Rv_KO_CtpC | -0.386 | 0.703 |
| H37Rv_KO_CtpD | 0.858 | -0.392 |
| H37Rv_KO_Rv1272 | -0.351 | -1.409 |
| H37Rv_KO_SugABC | -2.024 | 0.769 |
| H37Rv_KO_MbtN | -0.968 | 0.201 |
| Trans05 | -0.654 | -0.782 |
| macrophage_unactivated | 0.537 | 1.016 |
| IL1 | 0.638 | -0.572 |
| Rapamycin | 2.099 | 0.353 |
| Tcell | -1.352 | -1.098 |
| GMCSF | 0.264 | -0.161 |
| IFNab | 1.769 | 0.973 |
| IFNg | 0.575 | -0.901 |
| IFNg_GMCSF1 | 0.16 | -0.396 |
| Rv1432_day32 | -2.021 | -0.763 |
| Rv1565c_day32 | 4.546 | 6.0 |
| secA2_input | -0.585 | 1.645 |
| delta_Rv3594 | 1.34 | 1.034 |
| delta_Rv3717 | -0.349 | -0.876 |
| delta_Rv3811 | 1.185 | 0.193 |
| delta_Rv0954 | 1.981 | 1.442 |
| PonA1 | -3.884 | -4.498 |
| EccD1_KO | -1.618 | -2.434 |
| EspI_KO | -0.61 | -1.891 |
| PE35_KO | -0.645 | -1.006 |
| PPE68_KO | -0.086 | 0.573 |
| glycerol2 | -1.321 | -2.071 |
| lignocerate | -1.072 | -1.006 |
| oleate | -1.941 | -3.116 |
| phosphatidylcholine | -0.808 | -2.3 |
| acetate | -0.279 | 0.595 |
| glucAc | -0.879 | 0.056 |
| Rv0950ko | -0.621 | -0.591 |
| Rv1096ko | -1.288 | -3.553 |
| Rv3684ko | 0.049 | 1.136 |
| delta_otsA_trehalose | 2.633 | -0.184 |