Top 10 genes with highest correlation to Rv2144c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2190c/- | (cc=0.4953) | info on Rv2190c/- |
| Rv2696c/- | (cc=0.4887) | info on Rv2696c/- |
| Rv3818/- | (cc=0.4757) | info on Rv3818/- |
| Rv1836c/- | (cc=0.469) | info on Rv1836c/- |
| Rv1623c/cydA | (cc=0.4666) | info on Rv1623c/cydA |
| Rv0019c/fhaB | (cc=0.4603) | info on Rv0019c/fhaB |
| Rv1821/secA2 | (cc=0.4565) | info on Rv1821/secA2 |
| Rv1551/plsB1 | (cc=0.4482) | info on Rv1551/plsB1 |
| Rv3862c/whiB6 | (cc=0.4464) | info on Rv3862c/whiB6 |
| Rv3593/lpqF | (cc=0.4459) | info on Rv3593/lpqF |
Correlation of Rv2144c/- with Rv1836c/-
Normalized LFCs for Rv2144c/-:
(description and provenance of datasets)
| Rv2144c/- | Rv1836c/- | |
| Fe_supp_jason_reseq | 0.521 | 3.703 |
| low_pH_jason_reseq | 0.626 | -0.44 |
| NO_jason_reseq | -0.927 | -0.69 |
| B6_jason_reseq | -3.023 | -0.292 |
| MHCII_jason_reseq | 0.455 | 0.492 |
| Isoniazid02 | 0.029 | -2.187 |
| Rifampicin4 | -0.485 | -2.943 |
| Ethambutol3 | -1.29 | -1.216 |
| Meropenem3 | -0.875 | -1.533 |
| Vancomycin16 | -1.297 | -2.653 |
| Rv2680_day32 | -1.589 | 1.226 |
| H37Rv_KO_MarP | -2.815 | -6.0 |
| hypoxia_3wks | 1.156 | -0.961 |
| hypoxia_6wks | 0.764 | -0.503 |
| glycerol | 1.074 | -0.202 |
| cholesterol | 1.058 | 0.253 |
| AJ | -0.698 | -0.232 |
| Bibs02 | -0.634 | -0.183 |
| Bibs02c | -0.147 | -0.209 |
| BL6 | 0.877 | 1.02 |
| BL6a | -0.423 | 1.339 |
| BXD01 | 0.361 | 1.272 |
| BXD010 | -0.09 | 0.323 |
| BXD011 | -0.71 | 1.988 |
| BXD03 | 0.9 | 0.341 |
| BXD04 | 3.075 | 0.563 |
| BXD05 | -0.095 | 1.21 |
| BXD06 | 0.951 | 0.523 |
| BXD07 | 0.906 | 0.865 |
| BXD08 | -0.015 | 1.248 |
| BXD09 | 0.289 | 0.95 |
| CAST | 0.474 | 0.21 |
| CCcont | -0.105 | 2.888 |
| DS01 | -0.782 | -0.236 |
| DS02 | 0.922 | -0.217 |
| DS04 | -0.673 | 0.883 |
| DS0c | -2.19 | 0.0 |
| GP01 | -0.107 | 0.964 |
| GP02 | 1.782 | 1.165 |
| GP0c | 0.59 | 1.002 |
| NOD | -0.641 | -0.225 |
| NZO | -2.982 | -0.199 |
| PWK | -1.377 | -0.196 |
| H37Rv_KO_CtpC | 0.918 | 0.739 |
| H37Rv_KO_CtpD | 0.097 | 0.918 |
| H37Rv_KO_Rv1272 | 0.629 | 0.953 |
| H37Rv_KO_SugABC | -1.308 | 1.362 |
| H37Rv_KO_MbtN | 3.1 | 1.116 |
| Trans05 | 0.462 | 1.066 |
| macrophage_unactivated | 0.843 | 0.669 |
| IL1 | 0.231 | 0.0 |
| Rapamycin | -1.274 | 0.227 |
| Tcell | -1.124 | 0.0 |
| GMCSF | 2.289 | 0.38 |
| IFNab | 0.157 | 1.844 |
| IFNg | 2.528 | 1.058 |
| IFNg_GMCSF1 | 1.895 | 0.452 |
| Rv1432_day32 | 0.0 | 1.748 |
| Rv1565c_day32 | -0.978 | 0.0 |
| secA2_input | -2.481 | -2.174 |
| delta_Rv3594 | 1.26 | 2.695 |
| delta_Rv3717 | 2.162 | 3.555 |
| delta_Rv3811 | -0.431 | 2.842 |
| delta_Rv0954 | 0.305 | -1.461 |
| PonA1 | -1.445 | -1.387 |
| EccD1_KO | 0.408 | 0.148 |
| EspI_KO | 0.374 | -0.051 |
| PE35_KO | -0.744 | -1.496 |
| PPE68_KO | -0.666 | 0.0 |
| glycerol2 | -1.24 | -0.193 |
| lignocerate | -1.292 | -0.168 |
| oleate | 0.084 | -0.196 |
| phosphatidylcholine | -1.769 | -0.193 |
| acetate | -0.155 | 0.0 |
| glucAc | -2.339 | -0.143 |
| Rv0950ko | -2.409 | -6.0 |
| Rv1096ko | -0.856 | -0.03 |
| Rv3684ko | 0.776 | 1.677 |
| delta_otsA_trehalose | -1.141 | -0.288 |