Top 10 genes with highest correlation to Rv2144c/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv2190c/- | (cc=0.4953) | info on Rv2190c/- |
Rv2696c/- | (cc=0.4887) | info on Rv2696c/- |
Rv3818/- | (cc=0.4757) | info on Rv3818/- |
Rv1836c/- | (cc=0.469) | info on Rv1836c/- |
Rv1623c/cydA | (cc=0.4666) | info on Rv1623c/cydA |
Rv0019c/fhaB | (cc=0.4603) | info on Rv0019c/fhaB |
Rv1821/secA2 | (cc=0.4565) | info on Rv1821/secA2 |
Rv1551/plsB1 | (cc=0.4482) | info on Rv1551/plsB1 |
Rv3862c/whiB6 | (cc=0.4464) | info on Rv3862c/whiB6 |
Rv3593/lpqF | (cc=0.4459) | info on Rv3593/lpqF |
Correlation of Rv2144c/- with Rv2190c/-
Normalized LFCs for Rv2144c/-:
(description and provenance of datasets)
Rv2144c/- | Rv2190c/- | |
Fe_supp_jason_reseq | 0.521 | 2.516 |
low_pH_jason_reseq | 0.626 | -0.221 |
NO_jason_reseq | -0.927 | -3.877 |
B6_jason_reseq | -3.023 | -0.596 |
MHCII_jason_reseq | 0.455 | -0.565 |
Isoniazid02 | 0.029 | 0.563 |
Rifampicin4 | -0.485 | -3.541 |
Ethambutol3 | -1.29 | -2.182 |
Meropenem3 | -0.875 | -0.786 |
Vancomycin16 | -1.297 | -4.51 |
Rv2680_day32 | -1.589 | 2.417 |
H37Rv_KO_MarP | -2.815 | -6.0 |
hypoxia_3wks | 1.156 | -2.767 |
hypoxia_6wks | 0.764 | -0.228 |
glycerol | 1.074 | -0.098 |
cholesterol | 1.058 | 2.214 |
AJ | -0.698 | -1.276 |
Bibs02 | -0.634 | 0.993 |
Bibs02c | -0.147 | 1.306 |
BL6 | 0.877 | 3.063 |
BL6a | -0.423 | 2.749 |
BXD01 | 0.361 | 2.595 |
BXD010 | -0.09 | 2.438 |
BXD011 | -0.71 | 2.323 |
BXD03 | 0.9 | 2.42 |
BXD04 | 3.075 | 2.446 |
BXD05 | -0.095 | 3.337 |
BXD06 | 0.951 | 3.167 |
BXD07 | 0.906 | 2.933 |
BXD08 | -0.015 | 2.286 |
BXD09 | 0.289 | 3.087 |
CAST | 0.474 | -1.088 |
CCcont | -0.105 | 3.364 |
DS01 | -0.782 | 1.001 |
DS02 | 0.922 | 0.0 |
DS04 | -0.673 | 1.359 |
DS0c | -2.19 | 1.298 |
GP01 | -0.107 | 1.498 |
GP02 | 1.782 | -0.128 |
GP0c | 0.59 | 1.031 |
NOD | -0.641 | -1.061 |
NZO | -2.982 | -1.263 |
PWK | -1.377 | -0.786 |
H37Rv_KO_CtpC | 0.918 | 2.295 |
H37Rv_KO_CtpD | 0.097 | 1.805 |
H37Rv_KO_Rv1272 | 0.629 | 2.512 |
H37Rv_KO_SugABC | -1.308 | 1.815 |
H37Rv_KO_MbtN | 3.1 | 4.046 |
Trans05 | 0.462 | 2.172 |
macrophage_unactivated | 0.843 | 0.076 |
IL1 | 0.231 | 0.575 |
Rapamycin | -1.274 | -0.23 |
Tcell | -1.124 | -0.329 |
GMCSF | 2.289 | 0.568 |
IFNab | 0.157 | 1.103 |
IFNg | 2.528 | 1.563 |
IFNg_GMCSF1 | 1.895 | 0.575 |
Rv1432_day32 | 0.0 | 2.996 |
Rv1565c_day32 | -0.978 | 0.0 |
secA2_input | -2.481 | -4.612 |
delta_Rv3594 | 1.26 | 2.299 |
delta_Rv3717 | 2.162 | 2.896 |
delta_Rv3811 | -0.431 | 2.019 |
delta_Rv0954 | 0.305 | 0.358 |
PonA1 | -1.445 | -0.825 |
EccD1_KO | 0.408 | -1.766 |
EspI_KO | 0.374 | -1.634 |
PE35_KO | -0.744 | -3.246 |
PPE68_KO | -0.666 | -1.411 |
glycerol2 | -1.24 | -0.531 |
lignocerate | -1.292 | -0.462 |
oleate | 0.084 | -0.537 |
phosphatidylcholine | -1.769 | -0.531 |
acetate | -0.155 | 1.15 |
glucAc | -2.339 | 0.213 |
Rv0950ko | -2.409 | -6.0 |
Rv1096ko | -0.856 | -1.176 |
Rv3684ko | 0.776 | -0.364 |
delta_otsA_trehalose | -1.141 | 1.066 |