Top 10 genes with highest correlation to Rv2126c/PE_PGRS37:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2972c/- | (cc=0.5261) | info on Rv2972c/- |
| Rv2970A/- | (cc=0.4649) | info on Rv2970A/- |
| Rv2779c/- | (cc=0.4421) | info on Rv2779c/- |
| Rv3430c/- | (cc=0.4414) | info on Rv3430c/- |
| Rv1879/- | (cc=0.4323) | info on Rv1879/- |
| Rv1579c/- | (cc=0.4048) | info on Rv1579c/- |
| Rv3339c/icd1 | (cc=0.3928) | info on Rv3339c/icd1 |
| Rv0728c/serA2 | (cc=0.3883) | info on Rv0728c/serA2 |
| Rv3123/- | (cc=0.3877) | info on Rv3123/- |
| Rv1520/- | (cc=0.3711) | info on Rv1520/- |
Correlation of Rv2126c/PE_PGRS37 with Rv3123/-
Normalized LFCs for Rv2126c/PE_PGRS37:
(description and provenance of datasets)
| Rv2126c/PE_PGRS37 | Rv3123/- | |
| Fe_supp_jason_reseq | 0.257 | 0.284 |
| low_pH_jason_reseq | -0.065 | -0.109 |
| NO_jason_reseq | -0.722 | -0.15 |
| B6_jason_reseq | 0.766 | -0.259 |
| MHCII_jason_reseq | 0.501 | -0.627 |
| Isoniazid02 | 0.781 | 0.333 |
| Rifampicin4 | 0.853 | 1.132 |
| Ethambutol3 | 3.067 | 0.17 |
| Meropenem3 | 1.497 | 4.053 |
| Vancomycin16 | 0.799 | 0.732 |
| Rv2680_day32 | 1.032 | 1.147 |
| H37Rv_KO_MarP | -0.168 | -0.219 |
| hypoxia_3wks | -0.494 | -0.829 |
| hypoxia_6wks | -0.829 | -0.353 |
| glycerol | -0.186 | 1.181 |
| cholesterol | -0.961 | -0.312 |
| AJ | 0.615 | -0.013 |
| Bibs02 | 0.64 | 0.011 |
| Bibs02c | 0.997 | -2.029 |
| BL6 | -0.048 | 0.095 |
| BL6a | 0.913 | 0.383 |
| BXD01 | 1.015 | 0.583 |
| BXD010 | -0.391 | 0.559 |
| BXD011 | 1.425 | 0.984 |
| BXD03 | -0.482 | 0.489 |
| BXD04 | 1.608 | 0.803 |
| BXD05 | 0.507 | -0.641 |
| BXD06 | 0.699 | 1.313 |
| BXD07 | 0.693 | 1.024 |
| BXD08 | 0.98 | 0.801 |
| BXD09 | 0.359 | 0.768 |
| CAST | -1.268 | -0.749 |
| CCcont | -0.48 | 0.686 |
| DS01 | -0.457 | -0.163 |
| DS02 | -0.083 | 0.214 |
| DS04 | 0.814 | 1.696 |
| DS0c | -0.42 | 0.431 |
| GP01 | -1.837 | -0.529 |
| GP02 | -0.065 | -0.77 |
| GP0c | -0.636 | -0.792 |
| NOD | -0.27 | 0.067 |
| NZO | 0.282 | -1.049 |
| PWK | -0.35 | -0.861 |
| H37Rv_KO_CtpC | -0.195 | 0.727 |
| H37Rv_KO_CtpD | -0.84 | -2.311 |
| H37Rv_KO_Rv1272 | -0.776 | -0.144 |
| H37Rv_KO_SugABC | 0.966 | 0.37 |
| H37Rv_KO_MbtN | 1.055 | -1.375 |
| Trans05 | -0.836 | -2.431 |
| macrophage_unactivated | -0.41 | -1.398 |
| IL1 | 1.071 | 0.774 |
| Rapamycin | 0.896 | -1.013 |
| Tcell | 0.606 | 0.521 |
| GMCSF | 0.824 | 0.058 |
| IFNab | 0.396 | -0.931 |
| IFNg | 0.468 | -0.227 |
| IFNg_GMCSF1 | 0.688 | -0.641 |
| Rv1432_day32 | 0.284 | -0.434 |
| Rv1565c_day32 | -0.93 | -0.85 |
| secA2_input | 0.792 | 1.049 |
| delta_Rv3594 | -0.87 | -1.224 |
| delta_Rv3717 | -0.614 | -1.124 |
| delta_Rv3811 | -0.226 | -1.697 |
| delta_Rv0954 | -1.244 | -0.293 |
| PonA1 | -1.028 | -4.213 |
| EccD1_KO | -0.497 | 0.184 |
| EspI_KO | 0.2 | 0.619 |
| PE35_KO | -0.213 | -1.143 |
| PPE68_KO | -0.077 | -0.819 |
| glycerol2 | 0.349 | 0.974 |
| lignocerate | 0.026 | 0.132 |
| oleate | 1.404 | 0.048 |
| phosphatidylcholine | 0.514 | 0.332 |
| acetate | -0.256 | -0.454 |
| glucAc | -0.394 | -0.179 |
| Rv0950ko | -0.66 | 0.772 |
| Rv1096ko | -0.917 | 1.336 |
| Rv3684ko | -1.294 | 0.773 |
| delta_otsA_trehalose | 0.657 | 1.302 |