Top 10 genes with highest correlation to Rv2126c/PE_PGRS37:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2972c/- | (cc=0.5261) | info on Rv2972c/- |
| Rv2970A/- | (cc=0.4649) | info on Rv2970A/- |
| Rv2779c/- | (cc=0.4421) | info on Rv2779c/- |
| Rv3430c/- | (cc=0.4414) | info on Rv3430c/- |
| Rv1879/- | (cc=0.4323) | info on Rv1879/- |
| Rv1579c/- | (cc=0.4048) | info on Rv1579c/- |
| Rv3339c/icd1 | (cc=0.3928) | info on Rv3339c/icd1 |
| Rv0728c/serA2 | (cc=0.3883) | info on Rv0728c/serA2 |
| Rv3123/- | (cc=0.3877) | info on Rv3123/- |
| Rv1520/- | (cc=0.3711) | info on Rv1520/- |
Correlation of Rv2126c/PE_PGRS37 with Rv1579c/-
Normalized LFCs for Rv2126c/PE_PGRS37:
(description and provenance of datasets)
| Rv2126c/PE_PGRS37 | Rv1579c/- | |
| Fe_supp_jason_reseq | 0.257 | 0.379 |
| low_pH_jason_reseq | -0.065 | -0.023 |
| NO_jason_reseq | -0.722 | 0.475 |
| B6_jason_reseq | 0.766 | -0.016 |
| MHCII_jason_reseq | 0.501 | 0.814 |
| Isoniazid02 | 0.781 | 3.529 |
| Rifampicin4 | 0.853 | 0.517 |
| Ethambutol3 | 3.067 | 3.803 |
| Meropenem3 | 1.497 | 0.34 |
| Vancomycin16 | 0.799 | 0.753 |
| Rv2680_day32 | 1.032 | -0.554 |
| H37Rv_KO_MarP | -0.168 | -0.825 |
| hypoxia_3wks | -0.494 | 0.048 |
| hypoxia_6wks | -0.829 | -0.735 |
| glycerol | -0.186 | 0.206 |
| cholesterol | -0.961 | 0.614 |
| AJ | 0.615 | -1.874 |
| Bibs02 | 0.64 | -2.099 |
| Bibs02c | 0.997 | 0.136 |
| BL6 | -0.048 | -0.841 |
| BL6a | 0.913 | 0.273 |
| BXD01 | 1.015 | 0.994 |
| BXD010 | -0.391 | 0.423 |
| BXD011 | 1.425 | -0.619 |
| BXD03 | -0.482 | 0.105 |
| BXD04 | 1.608 | 1.109 |
| BXD05 | 0.507 | -0.466 |
| BXD06 | 0.699 | 1.219 |
| BXD07 | 0.693 | 1.17 |
| BXD08 | 0.98 | -0.275 |
| BXD09 | 0.359 | 0.911 |
| CAST | -1.268 | -0.295 |
| CCcont | -0.48 | 0.736 |
| DS01 | -0.457 | 0.958 |
| DS02 | -0.083 | 0.142 |
| DS04 | 0.814 | -0.672 |
| DS0c | -0.42 | 1.497 |
| GP01 | -1.837 | -1.849 |
| GP02 | -0.065 | -1.275 |
| GP0c | -0.636 | -2.791 |
| NOD | -0.27 | -1.751 |
| NZO | 0.282 | 0.104 |
| PWK | -0.35 | -0.539 |
| H37Rv_KO_CtpC | -0.195 | -1.051 |
| H37Rv_KO_CtpD | -0.84 | -0.143 |
| H37Rv_KO_Rv1272 | -0.776 | -1.139 |
| H37Rv_KO_SugABC | 0.966 | 1.045 |
| H37Rv_KO_MbtN | 1.055 | -1.104 |
| Trans05 | -0.836 | -0.228 |
| macrophage_unactivated | -0.41 | 0.391 |
| IL1 | 1.071 | 0.611 |
| Rapamycin | 0.896 | -1.924 |
| Tcell | 0.606 | -0.893 |
| GMCSF | 0.824 | -0.074 |
| IFNab | 0.396 | -1.001 |
| IFNg | 0.468 | 0.802 |
| IFNg_GMCSF1 | 0.688 | 0.0 |
| Rv1432_day32 | 0.284 | 0.18 |
| Rv1565c_day32 | -0.93 | 0.166 |
| secA2_input | 0.792 | -0.131 |
| delta_Rv3594 | -0.87 | -0.014 |
| delta_Rv3717 | -0.614 | -1.402 |
| delta_Rv3811 | -0.226 | -0.503 |
| delta_Rv0954 | -1.244 | -0.084 |
| PonA1 | -1.028 | -1.558 |
| EccD1_KO | -0.497 | -1.168 |
| EspI_KO | 0.2 | -1.743 |
| PE35_KO | -0.213 | -0.709 |
| PPE68_KO | -0.077 | -1.014 |
| glycerol2 | 0.349 | 0.039 |
| lignocerate | 0.026 | -0.587 |
| oleate | 1.404 | 0.318 |
| phosphatidylcholine | 0.514 | 0.09 |
| acetate | -0.256 | 0.612 |
| glucAc | -0.394 | -0.653 |
| Rv0950ko | -0.66 | -1.233 |
| Rv1096ko | -0.917 | -0.657 |
| Rv3684ko | -1.294 | -1.464 |
| delta_otsA_trehalose | 0.657 | -0.323 |