Top 10 genes with highest correlation to Rv2120c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0764c/cyp51 | (cc=0.448) | info on Rv0764c/cyp51 |
| Rv3619c/esxV | (cc=0.4432) | info on Rv3619c/esxV |
| Rv2125/- | (cc=0.4362) | info on Rv2125/- |
| Rv1992c/ctpG | (cc=0.4188) | info on Rv1992c/ctpG |
| Rv2015c/- | (cc=0.4059) | info on Rv2015c/- |
| Rv1789/PPE26 | (cc=0.4047) | info on Rv1789/PPE26 |
| Rv2601/speE | (cc=0.3976) | info on Rv2601/speE |
| Rv3707c/- | (cc=0.3969) | info on Rv3707c/- |
| Rv2917/- | (cc=0.3952) | info on Rv2917/- |
| Rv2923c/- | (cc=0.3941) | info on Rv2923c/- |
Correlation of Rv2120c/- with Rv3619c/esxV
Normalized LFCs for Rv2120c/-:
(description and provenance of datasets)
| Rv2120c/- | Rv3619c/esxV | |
| Fe_supp_jason_reseq | -0.106 | -0.543 |
| low_pH_jason_reseq | -0.925 | -1.957 |
| NO_jason_reseq | 0.0 | 0.0 |
| B6_jason_reseq | 0.613 | 0.294 |
| MHCII_jason_reseq | -2.318 | 0.323 |
| Isoniazid02 | 0.445 | -0.178 |
| Rifampicin4 | 0.295 | 0.382 |
| Ethambutol3 | 0.568 | 1.13 |
| Meropenem3 | -0.343 | -0.671 |
| Vancomycin16 | 0.0 | -0.31 |
| Rv2680_day32 | -0.362 | 0.586 |
| H37Rv_KO_MarP | -0.111 | -0.294 |
| hypoxia_3wks | 0.12 | 0.502 |
| hypoxia_6wks | -0.065 | 0.077 |
| glycerol | -0.622 | 0.391 |
| cholesterol | 0.95 | 0.104 |
| AJ | 0.496 | 0.442 |
| Bibs02 | 0.509 | -0.176 |
| Bibs02c | 0.106 | 0.682 |
| BL6 | -3.116 | -0.45 |
| BL6a | -0.884 | 0.022 |
| BXD01 | -0.658 | -0.606 |
| BXD010 | -1.078 | -0.514 |
| BXD011 | -1.328 | -0.118 |
| BXD03 | -1.184 | -0.268 |
| BXD04 | -0.484 | -0.35 |
| BXD05 | -1.202 | -0.896 |
| BXD06 | -1.339 | -0.306 |
| BXD07 | -1.213 | -0.979 |
| BXD08 | -1.977 | -0.547 |
| BXD09 | -1.008 | -0.185 |
| CAST | -0.105 | 0.142 |
| CCcont | -2.315 | -0.568 |
| DS01 | 0.234 | -0.758 |
| DS02 | -0.996 | -0.413 |
| DS04 | 0.495 | -0.271 |
| DS0c | -1.095 | -0.974 |
| GP01 | 0.583 | 0.034 |
| GP02 | -0.4 | -0.41 |
| GP0c | 0.413 | -0.136 |
| NOD | -0.103 | -0.485 |
| NZO | 0.588 | 0.259 |
| PWK | 0.043 | 0.199 |
| H37Rv_KO_CtpC | -2.271 | -0.977 |
| H37Rv_KO_CtpD | -1.346 | 0.022 |
| H37Rv_KO_Rv1272 | 0.696 | -0.355 |
| H37Rv_KO_SugABC | -0.377 | -1.13 |
| H37Rv_KO_MbtN | 0.659 | -0.326 |
| Trans05 | -2.362 | -1.018 |
| macrophage_unactivated | -1.553 | -0.698 |
| IL1 | 0.202 | -0.3 |
| Rapamycin | 0.157 | -0.764 |
| Tcell | -0.802 | -1.105 |
| GMCSF | 0.821 | 0.214 |
| IFNab | -0.62 | -0.076 |
| IFNg | -0.339 | 0.216 |
| IFNg_GMCSF1 | -1.395 | -0.22 |
| Rv1432_day32 | 0.301 | -0.03 |
| Rv1565c_day32 | -1.061 | -0.611 |
| secA2_input | 0.293 | 0.564 |
| delta_Rv3594 | 0.317 | -0.307 |
| delta_Rv3717 | -0.352 | 0.522 |
| delta_Rv3811 | 0.0 | 0.036 |
| delta_Rv0954 | -0.574 | 0.977 |
| PonA1 | 0.152 | -0.838 |
| EccD1_KO | -0.635 | 0.187 |
| EspI_KO | -1.015 | 0.074 |
| PE35_KO | -0.306 | -1.038 |
| PPE68_KO | -0.87 | -0.211 |
| glycerol2 | -0.503 | -0.587 |
| lignocerate | -1.02 | -0.828 |
| oleate | 0.034 | -0.291 |
| phosphatidylcholine | -0.686 | -0.62 |
| acetate | -0.873 | -0.71 |
| glucAc | -2.093 | -0.95 |
| Rv0950ko | -0.908 | -1.399 |
| Rv1096ko | -1.909 | -1.472 |
| Rv3684ko | -1.916 | -1.392 |
| delta_otsA_trehalose | -0.793 | -0.402 |