TnSeqCorr

Top 10 genes with highest correlation to Rv2092c/helY:

update plotcorrelationlink to info on gene
Rv0830/- (cc=0.4855) info on Rv0830/-
Rv2118c/- (cc=0.4735) info on Rv2118c/-
Rv1691/- (cc=0.4524) info on Rv1691/-
Rv0158/- (cc=0.4461) info on Rv0158/-
Rv2786c/ribF (cc=0.4319) info on Rv2786c/ribF
Rv2723/- (cc=0.4293) info on Rv2723/-
Rv2656c/- (cc=0.4248) info on Rv2656c/-
Rv1901/cinA (cc=0.4225) info on Rv1901/cinA
Rv3434c/- (cc=0.4191) info on Rv3434c/-
Rv3263/- (cc=0.4169) info on Rv3263/-

Correlation of Rv2092c/helY with Rv3263/-

Normalized LFCs for Rv2092c/helY:
(description and provenance of datasets)
Rv2092c/helYRv3263/-
Fe_supp_jason_reseq

-0.489

-1.905

low_pH_jason_reseq

0.694

-0.959

NO_jason_reseq

1.612

0.837

B6_jason_reseq

0.391

0.922

MHCII_jason_reseq

0.112

-0.43

Isoniazid02

-0.57

-0.489

Rifampicin4

-0.271

0.16

Ethambutol3

0.798

0.758

Meropenem3

-0.842

0.109

Vancomycin16

-0.528

-0.695

Rv2680_day32

-0.387

-0.234

H37Rv_KO_MarP

-0.367

-0.452

hypoxia_3wks

-1.232

-0.247

hypoxia_6wks

-0.507

0.578

glycerol

-0.041

-0.582

cholesterol

-0.037

-0.775

AJ

0.034

-0.21

Bibs02

0.098

-0.609

Bibs02c

-0.243

-0.332

BL6

-0.389

0.115

BL6a

-0.122

-0.258

BXD01

-0.422

0.184

BXD010

0.044

0.337

BXD011

-0.078

1.005

BXD03

-0.265

0.09

BXD04

0.649

0.789

BXD05

-0.323

0.495

BXD06

-0.199

0.821

BXD07

-0.215

0.652

BXD08

0.108

0.599

BXD09

-0.373

0.19

CAST

1.188

1.431

CCcont

-0.873

-1.225

DS01

-0.299

-0.944

DS02

-0.123

-0.731

DS04

-0.202

-0.682

DS0c

-0.426

-1.051

GP01

0.019

0.595

GP02

0.805

0.579

GP0c

-0.059

0.048

NOD

0.391

0.044

NZO

0.172

0.621

PWK

0.669

1.826

H37Rv_KO_CtpC

0.22

1.37

H37Rv_KO_CtpD

-0.058

0.098

H37Rv_KO_Rv1272

0.292

-0.939

H37Rv_KO_SugABC

0.019

0.037

H37Rv_KO_MbtN

-0.075

0.144

Trans05

0.686

0.422

macrophage_unactivated

-0.574

-1.591

IL1

-0.092

0.027

Rapamycin

-0.424

-0.789

Tcell

-0.179

0.469

GMCSF

-0.319

-0.325

IFNab

-0.048

-1.094

IFNg

0.061

0.457

IFNg_GMCSF1

-0.025

0.39

Rv1432_day32

-0.103

1.272

Rv1565c_day32

0.073

-1.303

secA2_input

0.493

0.507

delta_Rv3594

-0.489

0.381

delta_Rv3717

-0.287

0.79

delta_Rv3811

-0.43

0.272

delta_Rv0954

-0.691

0.044

PonA1

-0.762

-0.117

EccD1_KO

0.526

0.467

EspI_KO

0.607

-0.057

PE35_KO

0.05

0.222

PPE68_KO

0.339

0.042

glycerol2

0.055

0.905

lignocerate

0.138

0.463

oleate

-0.155

-0.22

phosphatidylcholine

0.626

1.006

acetate

0.527

-0.12

glucAc

-0.457

0.277

Rv0950ko

-0.051

0.645

Rv1096ko

-0.256

0.193

Rv3684ko

0.082

0.901

delta_otsA_trehalose

0.205

0.021