Top 10 genes with highest correlation to Rv2077A/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3819/- | (cc=0.542) | info on Rv3819/- |
| Rv2078/- | (cc=0.5327) | info on Rv2078/- |
| Rv3224B/- | (cc=0.5179) | info on Rv3224B/- |
| Rv2550c/vapB20 | (cc=0.4859) | info on Rv2550c/vapB20 |
| Rv0899/ompA | (cc=0.4723) | info on Rv0899/ompA |
| Rv2426c/- | (cc=0.4703) | info on Rv2426c/- |
| Rv2668/- | (cc=0.4624) | info on Rv2668/- |
| Rv0963c/- | (cc=0.4578) | info on Rv0963c/- |
| Rv3353c/- | (cc=0.4557) | info on Rv3353c/- |
| Rv2621c/- | (cc=0.4535) | info on Rv2621c/- |
Correlation of Rv2077A/- with Rv3819/-
Normalized LFCs for Rv2077A/-:
(description and provenance of datasets)
| Rv2077A/- | Rv3819/- | |
| Fe_supp_jason_reseq | 0.726 | -0.451 |
| low_pH_jason_reseq | -0.731 | -0.833 |
| NO_jason_reseq | 0.302 | -0.452 |
| B6_jason_reseq | 0.605 | -0.8 |
| MHCII_jason_reseq | -0.083 | -0.487 |
| Isoniazid02 | 0.519 | -0.799 |
| Rifampicin4 | 1.175 | -0.255 |
| Ethambutol3 | 0.283 | -0.342 |
| Meropenem3 | 2.531 | -0.285 |
| Vancomycin16 | 0.921 | -0.249 |
| Rv2680_day32 | -0.608 | 0.188 |
| H37Rv_KO_MarP | -0.825 | 1.153 |
| hypoxia_3wks | -0.072 | -1.348 |
| hypoxia_6wks | 0.681 | -0.942 |
| glycerol | -0.806 | -0.705 |
| cholesterol | -0.203 | -1.165 |
| AJ | 0.306 | -1.706 |
| Bibs02 | 1.582 | -0.816 |
| Bibs02c | -1.131 | -0.321 |
| BL6 | 0.097 | 1.018 |
| BL6a | -0.165 | -0.603 |
| BXD01 | 0.304 | 0.406 |
| BXD010 | 0.681 | 0.566 |
| BXD011 | 0.598 | -0.777 |
| BXD03 | -0.158 | -0.581 |
| BXD04 | 0.939 | 0.28 |
| BXD05 | -0.235 | -0.295 |
| BXD06 | -0.233 | -0.446 |
| BXD07 | 0.183 | 0.602 |
| BXD08 | 0.373 | 0.382 |
| BXD09 | 0.014 | -0.58 |
| CAST | 0.424 | 0.756 |
| CCcont | 0.672 | 1.057 |
| DS01 | -0.25 | 0.736 |
| DS02 | -0.9 | -0.148 |
| DS04 | 0.422 | 0.843 |
| DS0c | 0.248 | -1.501 |
| GP01 | -0.469 | -2.323 |
| GP02 | -1.351 | -0.576 |
| GP0c | -1.232 | -2.26 |
| NOD | 0.981 | 2.603 |
| NZO | 0.35 | 0.47 |
| PWK | 0.737 | 1.017 |
| H37Rv_KO_CtpC | 0.804 | -0.401 |
| H37Rv_KO_CtpD | -0.642 | 0.763 |
| H37Rv_KO_Rv1272 | -0.058 | -0.833 |
| H37Rv_KO_SugABC | -1.562 | -0.316 |
| H37Rv_KO_MbtN | 0.591 | -0.854 |
| Trans05 | 1.343 | -0.605 |
| macrophage_unactivated | 2.216 | 0.956 |
| IL1 | -0.828 | -1.922 |
| Rapamycin | -1.7 | -1.703 |
| Tcell | 0.935 | 0.476 |
| GMCSF | -0.586 | -1.584 |
| IFNab | -0.671 | -1.542 |
| IFNg | -0.85 | -1.732 |
| IFNg_GMCSF1 | -1.32 | -2.19 |
| Rv1432_day32 | -0.365 | 0.374 |
| Rv1565c_day32 | -0.193 | 0.556 |
| secA2_input | 1.224 | -1.446 |
| delta_Rv3594 | 0.034 | -0.304 |
| delta_Rv3717 | 0.315 | -1.016 |
| delta_Rv3811 | 0.665 | 0.586 |
| delta_Rv0954 | 0.028 | 0.129 |
| PonA1 | -0.025 | -0.527 |
| EccD1_KO | 0.645 | 0.724 |
| EspI_KO | 0.225 | 0.248 |
| PE35_KO | 0.099 | -0.362 |
| PPE68_KO | -0.112 | 0.624 |
| glycerol2 | 1.62 | 1.651 |
| lignocerate | 1.939 | 2.557 |
| oleate | -0.282 | -0.556 |
| phosphatidylcholine | 1.745 | 2.018 |
| acetate | 1.983 | 4.972 |
| glucAc | 2.2 | 2.696 |
| Rv0950ko | 0.54 | 0.148 |
| Rv1096ko | 1.327 | 1.215 |
| Rv3684ko | 0.036 | 0.514 |
| delta_otsA_trehalose | 0.281 | 1.218 |