Top 10 genes with highest correlation to Rv2066/cobI:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3294c/- | (cc=0.5356) | info on Rv3294c/- |
| Rv1670/- | (cc=0.5156) | info on Rv1670/- |
| Rv3162c/- | (cc=0.51) | info on Rv3162c/- |
| Rv0317c/glpQ2 | (cc=0.4696) | info on Rv0317c/glpQ2 |
| Rv3015c/- | (cc=0.4689) | info on Rv3015c/- |
| Rv3507/PE_PGRS53 | (cc=0.4653) | info on Rv3507/PE_PGRS53 |
| Rv1859/modC | (cc=0.4573) | info on Rv1859/modC |
| Rv2090/- | (cc=0.4351) | info on Rv2090/- |
| Rv3084/lipR | (cc=0.4343) | info on Rv3084/lipR |
| Rv1940/ribA1 | (cc=0.4126) | info on Rv1940/ribA1 |
Correlation of Rv2066/cobI with Rv3507/PE_PGRS53
Normalized LFCs for Rv2066/cobI:
(description and provenance of datasets)
| Rv2066/cobI | Rv3507/PE_PGRS53 | |
| Fe_supp_jason_reseq | -0.193 | -0.614 |
| low_pH_jason_reseq | -0.268 | 0.043 |
| NO_jason_reseq | -0.302 | -0.139 |
| B6_jason_reseq | -0.52 | -0.47 |
| MHCII_jason_reseq | 0.533 | 0.075 |
| Isoniazid02 | -0.907 | -0.083 |
| Rifampicin4 | 0.479 | 0.812 |
| Ethambutol3 | -0.496 | 0.665 |
| Meropenem3 | 0.087 | 0.829 |
| Vancomycin16 | -0.438 | 0.35 |
| Rv2680_day32 | 0.847 | 0.814 |
| H37Rv_KO_MarP | -0.356 | 0.47 |
| hypoxia_3wks | -0.219 | 0.207 |
| hypoxia_6wks | -0.804 | -0.687 |
| glycerol | -0.028 | 1.441 |
| cholesterol | 0.675 | 1.125 |
| AJ | 0.501 | 0.57 |
| Bibs02 | 0.868 | 0.449 |
| Bibs02c | 0.045 | 0.584 |
| BL6 | -0.725 | -0.642 |
| BL6a | -0.575 | -0.131 |
| BXD01 | -0.282 | -0.057 |
| BXD010 | -1.117 | -0.114 |
| BXD011 | -0.974 | -0.653 |
| BXD03 | -0.106 | 0.057 |
| BXD04 | -0.151 | -0.511 |
| BXD05 | -0.481 | -0.058 |
| BXD06 | -1.071 | -0.355 |
| BXD07 | -0.621 | -0.446 |
| BXD08 | -0.34 | -0.317 |
| BXD09 | -0.975 | -0.335 |
| CAST | -0.062 | 0.527 |
| CCcont | -0.542 | -0.317 |
| DS01 | 0.306 | -0.563 |
| DS02 | 0.391 | 0.0 |
| DS04 | 0.682 | 0.342 |
| DS0c | -0.149 | 0.135 |
| GP01 | 0.943 | 1.147 |
| GP02 | 0.078 | 0.955 |
| GP0c | -0.416 | 0.405 |
| NOD | -0.413 | 1.209 |
| NZO | 0.275 | 0.0 |
| PWK | 0.151 | -0.129 |
| H37Rv_KO_CtpC | -0.58 | 0.506 |
| H37Rv_KO_CtpD | -0.034 | 0.944 |
| H37Rv_KO_Rv1272 | 0.487 | 0.461 |
| H37Rv_KO_SugABC | -0.064 | -0.348 |
| H37Rv_KO_MbtN | 0.009 | 0.487 |
| Trans05 | 0.472 | 0.635 |
| macrophage_unactivated | 0.025 | 0.524 |
| IL1 | 0.988 | 0.0 |
| Rapamycin | 0.172 | -0.11 |
| Tcell | -0.446 | -0.613 |
| GMCSF | 0.29 | 0.182 |
| IFNab | 0.169 | -0.816 |
| IFNg | -0.39 | 0.184 |
| IFNg_GMCSF1 | 0.575 | 0.421 |
| Rv1432_day32 | -0.039 | 0.266 |
| Rv1565c_day32 | -0.577 | -0.069 |
| secA2_input | -0.369 | -0.285 |
| delta_Rv3594 | 0.304 | -0.13 |
| delta_Rv3717 | 0.009 | 0.574 |
| delta_Rv3811 | 0.042 | 0.678 |
| delta_Rv0954 | 0.28 | -0.11 |
| PonA1 | 0.38 | 0.323 |
| EccD1_KO | -0.391 | -0.375 |
| EspI_KO | -0.833 | -0.411 |
| PE35_KO | -0.563 | -1.041 |
| PPE68_KO | -0.797 | -1.312 |
| glycerol2 | -0.217 | -0.261 |
| lignocerate | 0.038 | -0.197 |
| oleate | 0.305 | -0.23 |
| phosphatidylcholine | -0.099 | -0.406 |
| acetate | -0.173 | -0.667 |
| glucAc | -0.16 | 0.044 |
| Rv0950ko | 0.594 | 0.359 |
| Rv1096ko | -0.419 | 0.525 |
| Rv3684ko | 0.462 | 0.39 |
| delta_otsA_trehalose | 1.121 | 0.27 |