Top 10 genes with highest correlation to Rv2066/cobI:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3294c/- | (cc=0.5356) | info on Rv3294c/- |
| Rv1670/- | (cc=0.5156) | info on Rv1670/- |
| Rv3162c/- | (cc=0.51) | info on Rv3162c/- |
| Rv0317c/glpQ2 | (cc=0.4696) | info on Rv0317c/glpQ2 |
| Rv3015c/- | (cc=0.4689) | info on Rv3015c/- |
| Rv3507/PE_PGRS53 | (cc=0.4653) | info on Rv3507/PE_PGRS53 |
| Rv1859/modC | (cc=0.4573) | info on Rv1859/modC |
| Rv2090/- | (cc=0.4351) | info on Rv2090/- |
| Rv3084/lipR | (cc=0.4343) | info on Rv3084/lipR |
| Rv1940/ribA1 | (cc=0.4126) | info on Rv1940/ribA1 |
Correlation of Rv2066/cobI with Rv1670/-
Normalized LFCs for Rv2066/cobI:
(description and provenance of datasets)
| Rv2066/cobI | Rv1670/- | |
| Fe_supp_jason_reseq | -0.193 | 0.159 |
| low_pH_jason_reseq | -0.268 | 0.853 |
| NO_jason_reseq | -0.302 | -0.336 |
| B6_jason_reseq | -0.52 | -0.578 |
| MHCII_jason_reseq | 0.533 | -0.336 |
| Isoniazid02 | -0.907 | -1.702 |
| Rifampicin4 | 0.479 | -0.366 |
| Ethambutol3 | -0.496 | -0.933 |
| Meropenem3 | 0.087 | -1.155 |
| Vancomycin16 | -0.438 | -0.576 |
| Rv2680_day32 | 0.847 | 1.862 |
| H37Rv_KO_MarP | -0.356 | 0.041 |
| hypoxia_3wks | -0.219 | 0.411 |
| hypoxia_6wks | -0.804 | 0.626 |
| glycerol | -0.028 | -0.295 |
| cholesterol | 0.675 | 0.577 |
| AJ | 0.501 | 0.234 |
| Bibs02 | 0.868 | 0.984 |
| Bibs02c | 0.045 | 0.811 |
| BL6 | -0.725 | -1.179 |
| BL6a | -0.575 | -0.451 |
| BXD01 | -0.282 | 0.009 |
| BXD010 | -1.117 | -1.115 |
| BXD011 | -0.974 | -0.615 |
| BXD03 | -0.106 | 0.286 |
| BXD04 | -0.151 | -1.143 |
| BXD05 | -0.481 | 0.216 |
| BXD06 | -1.071 | -1.258 |
| BXD07 | -0.621 | -0.603 |
| BXD08 | -0.34 | 0.734 |
| BXD09 | -0.975 | -1.018 |
| CAST | -0.062 | 0.4 |
| CCcont | -0.542 | -0.72 |
| DS01 | 0.306 | 0.486 |
| DS02 | 0.391 | 1.583 |
| DS04 | 0.682 | 0.447 |
| DS0c | -0.149 | 1.436 |
| GP01 | 0.943 | 1.015 |
| GP02 | 0.078 | 0.636 |
| GP0c | -0.416 | -0.551 |
| NOD | -0.413 | 0.317 |
| NZO | 0.275 | 0.03 |
| PWK | 0.151 | 0.946 |
| H37Rv_KO_CtpC | -0.58 | -0.4 |
| H37Rv_KO_CtpD | -0.034 | 1.254 |
| H37Rv_KO_Rv1272 | 0.487 | -0.403 |
| H37Rv_KO_SugABC | -0.064 | -0.216 |
| H37Rv_KO_MbtN | 0.009 | -1.361 |
| Trans05 | 0.472 | 0.4 |
| macrophage_unactivated | 0.025 | -0.234 |
| IL1 | 0.988 | 2.554 |
| Rapamycin | 0.172 | -0.227 |
| Tcell | -0.446 | -0.583 |
| GMCSF | 0.29 | -0.694 |
| IFNab | 0.169 | 0.073 |
| IFNg | -0.39 | -0.131 |
| IFNg_GMCSF1 | 0.575 | -0.647 |
| Rv1432_day32 | -0.039 | -0.575 |
| Rv1565c_day32 | -0.577 | -1.366 |
| secA2_input | -0.369 | 0.316 |
| delta_Rv3594 | 0.304 | 0.337 |
| delta_Rv3717 | 0.009 | 0.053 |
| delta_Rv3811 | 0.042 | -0.116 |
| delta_Rv0954 | 0.28 | 0.497 |
| PonA1 | 0.38 | 0.0 |
| EccD1_KO | -0.391 | 0.743 |
| EspI_KO | -0.833 | 0.285 |
| PE35_KO | -0.563 | 0.636 |
| PPE68_KO | -0.797 | -0.093 |
| glycerol2 | -0.217 | -0.135 |
| lignocerate | 0.038 | -0.634 |
| oleate | 0.305 | 0.237 |
| phosphatidylcholine | -0.099 | -0.34 |
| acetate | -0.173 | -0.477 |
| glucAc | -0.16 | -1.143 |
| Rv0950ko | 0.594 | 0.392 |
| Rv1096ko | -0.419 | -0.911 |
| Rv3684ko | 0.462 | -0.354 |
| delta_otsA_trehalose | 1.121 | 0.817 |