Top 10 genes with highest correlation to Rv2041c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3249c/- | (cc=0.5414) | info on Rv3249c/- |
| Rv1739c/- | (cc=0.4817) | info on Rv1739c/- |
| Rv2389c/rpfD | (cc=0.4743) | info on Rv2389c/rpfD |
| Rv2955c/- | (cc=0.4663) | info on Rv2955c/- |
| Rv1869c/- | (cc=0.4468) | info on Rv1869c/- |
| Rv2270/lppN | (cc=0.4334) | info on Rv2270/lppN |
| Rv2367c/- | (cc=0.4299) | info on Rv2367c/- |
| Rv2629/- | (cc=0.4208) | info on Rv2629/- |
| Rv2417c/- | (cc=0.4162) | info on Rv2417c/- |
| Rv2293c/- | (cc=0.4093) | info on Rv2293c/- |
Correlation of Rv2041c/- with Rv2270/lppN
Normalized LFCs for Rv2041c/-:
(description and provenance of datasets)
| Rv2041c/- | Rv2270/lppN | |
| Fe_supp_jason_reseq | -0.942 | 0.71 |
| low_pH_jason_reseq | 1.092 | -0.323 |
| NO_jason_reseq | -0.318 | -0.318 |
| B6_jason_reseq | -0.376 | 0.63 |
| MHCII_jason_reseq | 0.141 | -0.077 |
| Isoniazid02 | 0.188 | -0.26 |
| Rifampicin4 | -0.16 | 0.401 |
| Ethambutol3 | 0.178 | -0.185 |
| Meropenem3 | 2.337 | 0.398 |
| Vancomycin16 | 0.05 | 0.096 |
| Rv2680_day32 | -0.593 | 0.184 |
| H37Rv_KO_MarP | 0.611 | 0.459 |
| hypoxia_3wks | -0.06 | -0.315 |
| hypoxia_6wks | 0.157 | -0.031 |
| glycerol | 0.0 | 0.553 |
| cholesterol | -0.132 | -0.164 |
| AJ | 0.56 | -0.629 |
| Bibs02 | -0.109 | -1.25 |
| Bibs02c | -0.191 | 0.638 |
| BL6 | 0.481 | -1.299 |
| BL6a | 0.093 | -0.033 |
| BXD01 | -0.712 | -0.933 |
| BXD010 | 0.896 | 0.595 |
| BXD011 | -0.063 | 0.081 |
| BXD03 | 0.101 | -1.289 |
| BXD04 | 0.425 | -0.581 |
| BXD05 | 0.935 | 0.086 |
| BXD06 | 0.05 | -0.435 |
| BXD07 | 0.04 | -0.222 |
| BXD08 | -0.417 | -0.931 |
| BXD09 | -0.069 | -0.184 |
| CAST | -0.309 | -0.324 |
| CCcont | -0.014 | -1.924 |
| DS01 | -0.477 | -0.058 |
| DS02 | -0.572 | -0.246 |
| DS04 | -0.347 | -0.505 |
| DS0c | -0.709 | -0.284 |
| GP01 | -1.43 | -0.614 |
| GP02 | -1.661 | -0.102 |
| GP0c | -1.019 | -0.734 |
| NOD | 0.923 | 0.805 |
| NZO | -0.059 | -0.964 |
| PWK | -0.284 | 0.033 |
| H37Rv_KO_CtpC | -0.785 | 0.104 |
| H37Rv_KO_CtpD | 0.755 | -0.251 |
| H37Rv_KO_Rv1272 | 0.18 | 0.998 |
| H37Rv_KO_SugABC | 0.135 | 0.159 |
| H37Rv_KO_MbtN | -0.467 | -0.597 |
| Trans05 | -0.344 | 0.103 |
| macrophage_unactivated | 0.754 | -0.376 |
| IL1 | 0.086 | 0.273 |
| Rapamycin | -0.031 | -0.761 |
| Tcell | -0.427 | -0.124 |
| GMCSF | 0.364 | -0.597 |
| IFNab | -0.209 | -0.057 |
| IFNg | 0.0 | 0.43 |
| IFNg_GMCSF1 | 0.751 | 0.346 |
| Rv1432_day32 | -0.164 | 0.621 |
| Rv1565c_day32 | -0.862 | -1.199 |
| secA2_input | -1.501 | -1.276 |
| delta_Rv3594 | 0.021 | 1.115 |
| delta_Rv3717 | -0.516 | 0.203 |
| delta_Rv3811 | 0.0 | 1.715 |
| delta_Rv0954 | -1.31 | 0.048 |
| PonA1 | -0.518 | -0.235 |
| EccD1_KO | 0.293 | 1.579 |
| EspI_KO | 0.887 | 1.845 |
| PE35_KO | 1.117 | 3.106 |
| PPE68_KO | 0.995 | 3.318 |
| glycerol2 | -0.849 | -1.544 |
| lignocerate | -0.818 | -2.176 |
| oleate | -0.211 | -1.198 |
| phosphatidylcholine | -0.594 | -1.751 |
| acetate | -0.705 | -2.622 |
| glucAc | -0.718 | -2.001 |
| Rv0950ko | 0.274 | 0.464 |
| Rv1096ko | 0.048 | -0.341 |
| Rv3684ko | 0.757 | -0.144 |
| delta_otsA_trehalose | 0.691 | 0.272 |