Top 10 genes with highest correlation to Rv2026c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1281c/oppD | (cc=0.4718) | info on Rv1281c/oppD |
| Rv0621/- | (cc=0.4707) | info on Rv0621/- |
| Rv1541c/lprI | (cc=0.4572) | info on Rv1541c/lprI |
| Rv1052/- | (cc=0.4542) | info on Rv1052/- |
| Rv2515c/- | (cc=0.4455) | info on Rv2515c/- |
| Rv1053c/- | (cc=0.4435) | info on Rv1053c/- |
| Rv0406c/- | (cc=0.4391) | info on Rv0406c/- |
| Rv2270/lppN | (cc=0.4255) | info on Rv2270/lppN |
| Rv0936/pstA2 | (cc=0.4185) | info on Rv0936/pstA2 |
| Rv2765/- | (cc=0.4115) | info on Rv2765/- |
Correlation of Rv2026c/- with Rv0936/pstA2
Normalized LFCs for Rv2026c/-:
(description and provenance of datasets)
| Rv2026c/- | Rv0936/pstA2 | |
| Fe_supp_jason_reseq | 1.432 | -0.709 |
| low_pH_jason_reseq | 0.656 | -0.507 |
| NO_jason_reseq | -0.788 | -0.134 |
| B6_jason_reseq | -0.6 | 0.712 |
| MHCII_jason_reseq | 1.549 | 1.013 |
| Isoniazid02 | 0.0 | 0.413 |
| Rifampicin4 | -1.749 | -0.114 |
| Ethambutol3 | -0.505 | -0.159 |
| Meropenem3 | 0.763 | 0.42 |
| Vancomycin16 | -0.218 | 0.369 |
| Rv2680_day32 | -0.034 | -1.114 |
| H37Rv_KO_MarP | -0.965 | 0.46 |
| hypoxia_3wks | -0.989 | -0.869 |
| hypoxia_6wks | 0.443 | 0.056 |
| glycerol | -0.666 | 0.768 |
| cholesterol | -0.857 | 0.144 |
| AJ | -1.049 | -0.503 |
| Bibs02 | 0.0 | 0.29 |
| Bibs02c | 0.658 | 0.449 |
| BL6 | -1.711 | -0.65 |
| BL6a | -1.492 | -0.459 |
| BXD01 | -1.424 | -1.0 |
| BXD010 | -0.373 | -0.829 |
| BXD011 | -1.294 | -0.517 |
| BXD03 | -0.942 | -0.175 |
| BXD04 | -1.256 | -1.173 |
| BXD05 | 0.607 | -0.076 |
| BXD06 | -1.459 | -0.959 |
| BXD07 | -1.755 | -0.866 |
| BXD08 | -1.255 | -0.923 |
| BXD09 | -1.536 | -0.758 |
| CAST | -0.671 | -0.072 |
| CCcont | -1.41 | -1.245 |
| DS01 | 0.537 | 0.506 |
| DS02 | 1.136 | 0.203 |
| DS04 | 0.208 | -0.479 |
| DS0c | 0.176 | 0.691 |
| GP01 | -1.252 | -1.29 |
| GP02 | -1.055 | -0.108 |
| GP0c | -1.139 | -0.024 |
| NOD | -1.329 | 0.028 |
| NZO | -1.883 | -0.301 |
| PWK | 0.885 | 0.259 |
| H37Rv_KO_CtpC | 1.583 | -0.98 |
| H37Rv_KO_CtpD | -1.49 | -0.751 |
| H37Rv_KO_Rv1272 | 1.721 | 0.017 |
| H37Rv_KO_SugABC | -1.165 | -0.128 |
| H37Rv_KO_MbtN | 1.394 | -0.337 |
| Trans05 | 0.297 | -1.524 |
| macrophage_unactivated | 0.202 | -1.209 |
| IL1 | -0.86 | -0.572 |
| Rapamycin | 0.905 | -0.344 |
| Tcell | -0.945 | -1.199 |
| GMCSF | -0.766 | -0.929 |
| IFNab | -0.877 | -0.583 |
| IFNg | -0.567 | 0.219 |
| IFNg_GMCSF1 | 0.201 | 0.292 |
| Rv1432_day32 | 0.0 | -0.089 |
| Rv1565c_day32 | -0.199 | 0.873 |
| secA2_input | -1.061 | -0.279 |
| delta_Rv3594 | 0.714 | 0.046 |
| delta_Rv3717 | 0.906 | -0.785 |
| delta_Rv3811 | 0.454 | -0.094 |
| delta_Rv0954 | -0.112 | 0.189 |
| PonA1 | -0.1 | -0.227 |
| EccD1_KO | 2.717 | 0.911 |
| EspI_KO | 0.687 | 0.114 |
| PE35_KO | 0.537 | 1.044 |
| PPE68_KO | 0.771 | 0.832 |
| glycerol2 | -0.95 | -0.998 |
| lignocerate | -0.659 | -0.656 |
| oleate | -0.961 | -0.842 |
| phosphatidylcholine | -0.95 | -0.832 |
| acetate | -0.899 | -0.68 |
| glucAc | -0.429 | -0.449 |
| Rv0950ko | 0.172 | 0.0 |
| Rv1096ko | 0.935 | -0.54 |
| Rv3684ko | 0.364 | -0.383 |
| delta_otsA_trehalose | -1.655 | -1.354 |