Top 10 genes with highest correlation to Rv1984c/cfp21:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1918c/PPE35 | (cc=0.7018) | info on Rv1918c/PPE35 |
| Rv1521/fadD25 | (cc=0.6673) | info on Rv1521/fadD25 |
| Rv2339/mmpL9 | (cc=0.6427) | info on Rv2339/mmpL9 |
| Rv1917c/PPE34 | (cc=0.5881) | info on Rv1917c/PPE34 |
| Rv1949c/- | (cc=0.5857) | info on Rv1949c/- |
| Rv1500/- | (cc=0.5748) | info on Rv1500/- |
| Rv2735c/- | (cc=0.5604) | info on Rv2735c/- |
| Rv3020c/esxS | (cc=0.5411) | info on Rv3020c/esxS |
| Rv3110/moaB1 | (cc=0.5337) | info on Rv3110/moaB1 |
| Rv3429/PPE59 | (cc=0.5325) | info on Rv3429/PPE59 |
Correlation of Rv1984c/cfp21 with Rv1521/fadD25
Normalized LFCs for Rv1984c/cfp21:
(description and provenance of datasets)
| Rv1984c/cfp21 | Rv1521/fadD25 | |
| Fe_supp_jason_reseq | 0.775 | 1.408 |
| low_pH_jason_reseq | -0.08 | -0.495 |
| NO_jason_reseq | -0.307 | 0.0 |
| B6_jason_reseq | -0.195 | 0.444 |
| MHCII_jason_reseq | -0.398 | 0.125 |
| Isoniazid02 | 0.14 | -0.183 |
| Rifampicin4 | -0.03 | 0.133 |
| Ethambutol3 | 0.339 | 0.322 |
| Meropenem3 | 0.258 | 0.081 |
| Vancomycin16 | -0.623 | 0.379 |
| Rv2680_day32 | -0.478 | 0.161 |
| H37Rv_KO_MarP | -0.358 | 0.0 |
| hypoxia_3wks | -0.215 | 0.698 |
| hypoxia_6wks | -0.695 | 0.576 |
| glycerol | -2.041 | -0.404 |
| cholesterol | -0.796 | -0.35 |
| AJ | -0.134 | 0.274 |
| Bibs02 | -0.244 | 0.539 |
| Bibs02c | 0.239 | -0.537 |
| BL6 | -0.179 | 0.492 |
| BL6a | 0.532 | 0.408 |
| BXD01 | 0.26 | 0.906 |
| BXD010 | 0.816 | 1.149 |
| BXD011 | 0.199 | 0.802 |
| BXD03 | 0.416 | 1.018 |
| BXD04 | 0.92 | 1.19 |
| BXD05 | 0.235 | 0.952 |
| BXD06 | 0.017 | 0.737 |
| BXD07 | 0.321 | 0.688 |
| BXD08 | 0.266 | 1.121 |
| BXD09 | 0.138 | 0.668 |
| CAST | -0.307 | 0.052 |
| CCcont | -0.551 | 0.478 |
| DS01 | -0.373 | 0.027 |
| DS02 | -0.377 | 0.0 |
| DS04 | -0.059 | -0.045 |
| DS0c | -0.226 | -0.05 |
| GP01 | 0.853 | 0.634 |
| GP02 | 0.353 | 1.092 |
| GP0c | 0.409 | 0.726 |
| NOD | -0.14 | 0.524 |
| NZO | -0.483 | -0.023 |
| PWK | -0.104 | -0.59 |
| H37Rv_KO_CtpC | 0.108 | 1.032 |
| H37Rv_KO_CtpD | 1.094 | 1.28 |
| H37Rv_KO_Rv1272 | 1.786 | 1.45 |
| H37Rv_KO_SugABC | 0.713 | 0.767 |
| H37Rv_KO_MbtN | 0.425 | 1.982 |
| Trans05 | 0.807 | 1.332 |
| macrophage_unactivated | 0.464 | 0.505 |
| IL1 | -0.053 | 0.552 |
| Rapamycin | 0.092 | 0.703 |
| Tcell | -0.137 | 0.404 |
| GMCSF | 0.079 | 0.129 |
| IFNab | -0.073 | 0.72 |
| IFNg | 0.436 | 0.476 |
| IFNg_GMCSF1 | 0.289 | 0.531 |
| Rv1432_day32 | 0.445 | 0.169 |
| Rv1565c_day32 | 0.567 | 0.313 |
| secA2_input | -0.78 | -0.762 |
| delta_Rv3594 | -0.147 | 0.515 |
| delta_Rv3717 | -0.551 | -0.225 |
| delta_Rv3811 | -0.604 | 0.0 |
| delta_Rv0954 | -0.466 | -0.127 |
| PonA1 | -0.905 | -0.18 |
| EccD1_KO | -0.474 | 0.033 |
| EspI_KO | 0.14 | 0.314 |
| PE35_KO | -0.012 | 0.347 |
| PPE68_KO | 0.074 | 0.65 |
| glycerol2 | -0.203 | -0.149 |
| lignocerate | -0.379 | -0.496 |
| oleate | 0.203 | 0.067 |
| phosphatidylcholine | 0.303 | -0.045 |
| acetate | -0.517 | -0.308 |
| glucAc | -1.067 | -0.773 |
| Rv0950ko | -0.286 | 0.193 |
| Rv1096ko | -1.463 | -1.194 |
| Rv3684ko | -0.088 | -0.793 |
| delta_otsA_trehalose | -1.63 | 0.144 |