Top 10 genes with highest correlation to Rv1982c/vapC36:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3225c/- | (cc=0.4366) | info on Rv3225c/- |
| Rv1303/- | (cc=0.3994) | info on Rv1303/- |
| Rv1145/mmpL13a | (cc=0.3872) | info on Rv1145/mmpL13a |
| Rv3238c/- | (cc=0.3733) | info on Rv3238c/- |
| Rv2616/- | (cc=0.3697) | info on Rv2616/- |
| Rv1582c/- | (cc=0.3562) | info on Rv1582c/- |
| Rv0646c/lipG | (cc=0.3512) | info on Rv0646c/lipG |
| Rv2315c/- | (cc=0.3501) | info on Rv2315c/- |
| Rv3695/- | (cc=0.3483) | info on Rv3695/- |
| Rv1861/- | (cc=0.3374) | info on Rv1861/- |
Correlation of Rv1982c/vapC36 with Rv3695/-
Normalized LFCs for Rv1982c/vapC36:
(description and provenance of datasets)
| Rv1982c/vapC36 | Rv3695/- | |
| Fe_supp_jason_reseq | 0.532 | -0.86 |
| low_pH_jason_reseq | -1.845 | -2.494 |
| NO_jason_reseq | -0.236 | -1.788 |
| B6_jason_reseq | 0.054 | -1.093 |
| MHCII_jason_reseq | -0.195 | -0.8 |
| Isoniazid02 | 0.017 | -0.787 |
| Rifampicin4 | -0.701 | 0.119 |
| Ethambutol3 | 1.301 | 0.829 |
| Meropenem3 | 0.137 | 0.603 |
| Vancomycin16 | -0.244 | 0.194 |
| Rv2680_day32 | -0.5 | -0.154 |
| H37Rv_KO_MarP | 0.277 | -1.541 |
| hypoxia_3wks | -0.179 | 0.163 |
| hypoxia_6wks | 0.104 | 0.572 |
| glycerol | -0.809 | -1.725 |
| cholesterol | -0.876 | -0.747 |
| AJ | 0.724 | 0.993 |
| Bibs02 | -0.151 | -0.384 |
| Bibs02c | -0.409 | 1.558 |
| BL6 | 0.369 | 1.26 |
| BL6a | -0.181 | 1.501 |
| BXD01 | -0.455 | 0.908 |
| BXD010 | -2.46 | 0.548 |
| BXD011 | -0.817 | -0.332 |
| BXD03 | -0.378 | 1.2 |
| BXD04 | -0.129 | 0.945 |
| BXD05 | -0.065 | 0.67 |
| BXD06 | 0.087 | 0.351 |
| BXD07 | 0.115 | 0.568 |
| BXD08 | -0.564 | 0.186 |
| BXD09 | 0.3 | 0.277 |
| CAST | 0.531 | 0.859 |
| CCcont | -0.365 | 0.793 |
| DS01 | -0.086 | -0.7 |
| DS02 | -0.934 | -1.122 |
| DS04 | 0.427 | 0.849 |
| DS0c | 0.627 | -0.933 |
| GP01 | 0.129 | 1.207 |
| GP02 | 0.883 | 0.442 |
| GP0c | 0.319 | 1.297 |
| NOD | 0.587 | -0.625 |
| NZO | -0.568 | 1.348 |
| PWK | 0.335 | 2.835 |
| H37Rv_KO_CtpC | 1.147 | 1.252 |
| H37Rv_KO_CtpD | -0.421 | -0.398 |
| H37Rv_KO_Rv1272 | -0.366 | 0.146 |
| H37Rv_KO_SugABC | 0.706 | 1.541 |
| H37Rv_KO_MbtN | 0.541 | 1.843 |
| Trans05 | -0.339 | -0.703 |
| macrophage_unactivated | -0.243 | -0.382 |
| IL1 | 0.658 | 0.184 |
| Rapamycin | -0.537 | -0.479 |
| Tcell | -0.655 | -0.212 |
| GMCSF | 0.111 | -0.084 |
| IFNab | 0.314 | 1.584 |
| IFNg | -0.024 | 0.192 |
| IFNg_GMCSF1 | -0.028 | 0.842 |
| Rv1432_day32 | -0.039 | -0.819 |
| Rv1565c_day32 | 0.385 | -0.746 |
| secA2_input | -1.75 | -2.552 |
| delta_Rv3594 | -0.754 | 1.231 |
| delta_Rv3717 | -0.371 | 0.714 |
| delta_Rv3811 | -0.317 | 0.526 |
| delta_Rv0954 | 0.14 | 0.18 |
| PonA1 | -0.541 | 1.809 |
| EccD1_KO | -0.286 | 1.02 |
| EspI_KO | -0.402 | -0.245 |
| PE35_KO | -0.461 | 0.236 |
| PPE68_KO | -0.435 | 0.506 |
| glycerol2 | -0.754 | -1.103 |
| lignocerate | -0.764 | -0.306 |
| oleate | -0.362 | 0.839 |
| phosphatidylcholine | -0.892 | -0.496 |
| acetate | 0.565 | 0.068 |
| glucAc | -0.602 | -0.089 |
| Rv0950ko | -0.443 | 0.582 |
| Rv1096ko | -0.214 | 1.99 |
| Rv3684ko | -0.052 | 2.109 |
| delta_otsA_trehalose | -0.313 | -0.457 |