Top 10 genes with highest correlation to Rv1982c/vapC36:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3225c/- | (cc=0.4366) | info on Rv3225c/- |
| Rv1303/- | (cc=0.3994) | info on Rv1303/- |
| Rv1145/mmpL13a | (cc=0.3872) | info on Rv1145/mmpL13a |
| Rv3238c/- | (cc=0.3733) | info on Rv3238c/- |
| Rv2616/- | (cc=0.3697) | info on Rv2616/- |
| Rv1582c/- | (cc=0.3562) | info on Rv1582c/- |
| Rv0646c/lipG | (cc=0.3512) | info on Rv0646c/lipG |
| Rv2315c/- | (cc=0.3501) | info on Rv2315c/- |
| Rv3695/- | (cc=0.3483) | info on Rv3695/- |
| Rv1861/- | (cc=0.3374) | info on Rv1861/- |
Correlation of Rv1982c/vapC36 with Rv1861/-
Normalized LFCs for Rv1982c/vapC36:
(description and provenance of datasets)
| Rv1982c/vapC36 | Rv1861/- | |
| Fe_supp_jason_reseq | 0.532 | -0.117 |
| low_pH_jason_reseq | -1.845 | -1.655 |
| NO_jason_reseq | -0.236 | 0.428 |
| B6_jason_reseq | 0.054 | -1.122 |
| MHCII_jason_reseq | -0.195 | -0.956 |
| Isoniazid02 | 0.017 | -0.723 |
| Rifampicin4 | -0.701 | -0.284 |
| Ethambutol3 | 1.301 | 0.428 |
| Meropenem3 | 0.137 | 1.029 |
| Vancomycin16 | -0.244 | -0.342 |
| Rv2680_day32 | -0.5 | 0.683 |
| H37Rv_KO_MarP | 0.277 | -0.428 |
| hypoxia_3wks | -0.179 | 0.63 |
| hypoxia_6wks | 0.104 | 1.165 |
| glycerol | -0.809 | -2.422 |
| cholesterol | -0.876 | -0.936 |
| AJ | 0.724 | 0.155 |
| Bibs02 | -0.151 | 0.057 |
| Bibs02c | -0.409 | -1.555 |
| BL6 | 0.369 | -0.072 |
| BL6a | -0.181 | -0.35 |
| BXD01 | -0.455 | 0.581 |
| BXD010 | -2.46 | 0.628 |
| BXD011 | -0.817 | 0.659 |
| BXD03 | -0.378 | 0.255 |
| BXD04 | -0.129 | 0.521 |
| BXD05 | -0.065 | -0.009 |
| BXD06 | 0.087 | 0.903 |
| BXD07 | 0.115 | 0.9 |
| BXD08 | -0.564 | 0.989 |
| BXD09 | 0.3 | 0.753 |
| CAST | 0.531 | 0.31 |
| CCcont | -0.365 | -0.188 |
| DS01 | -0.086 | 0.445 |
| DS02 | -0.934 | -0.199 |
| DS04 | 0.427 | 0.604 |
| DS0c | 0.627 | 0.696 |
| GP01 | 0.129 | 0.859 |
| GP02 | 0.883 | 1.048 |
| GP0c | 0.319 | 0.809 |
| NOD | 0.587 | 0.861 |
| NZO | -0.568 | 0.334 |
| PWK | 0.335 | 0.527 |
| H37Rv_KO_CtpC | 1.147 | 1.449 |
| H37Rv_KO_CtpD | -0.421 | 1.112 |
| H37Rv_KO_Rv1272 | -0.366 | 0.338 |
| H37Rv_KO_SugABC | 0.706 | 1.671 |
| H37Rv_KO_MbtN | 0.541 | 0.74 |
| Trans05 | -0.339 | 0.734 |
| macrophage_unactivated | -0.243 | 0.12 |
| IL1 | 0.658 | -0.617 |
| Rapamycin | -0.537 | 0.0 |
| Tcell | -0.655 | -0.192 |
| GMCSF | 0.111 | -0.396 |
| IFNab | 0.314 | -0.453 |
| IFNg | -0.024 | -0.363 |
| IFNg_GMCSF1 | -0.028 | -0.167 |
| Rv1432_day32 | -0.039 | 0.386 |
| Rv1565c_day32 | 0.385 | 0.297 |
| secA2_input | -1.75 | -0.194 |
| delta_Rv3594 | -0.754 | -0.11 |
| delta_Rv3717 | -0.371 | -0.41 |
| delta_Rv3811 | -0.317 | -0.556 |
| delta_Rv0954 | 0.14 | 0.417 |
| PonA1 | -0.541 | -0.129 |
| EccD1_KO | -0.286 | -0.046 |
| EspI_KO | -0.402 | 0.22 |
| PE35_KO | -0.461 | -0.064 |
| PPE68_KO | -0.435 | 0.352 |
| glycerol2 | -0.754 | -0.149 |
| lignocerate | -0.764 | -0.505 |
| oleate | -0.362 | 0.411 |
| phosphatidylcholine | -0.892 | -0.101 |
| acetate | 0.565 | -0.427 |
| glucAc | -0.602 | -1.002 |
| Rv0950ko | -0.443 | 1.061 |
| Rv1096ko | -0.214 | -0.196 |
| Rv3684ko | -0.052 | -1.055 |
| delta_otsA_trehalose | -0.313 | 0.247 |