Top 10 genes with highest correlation to Rv1982c/vapC36:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3225c/- | (cc=0.4366) | info on Rv3225c/- |
| Rv1303/- | (cc=0.3994) | info on Rv1303/- |
| Rv1145/mmpL13a | (cc=0.3872) | info on Rv1145/mmpL13a |
| Rv3238c/- | (cc=0.3733) | info on Rv3238c/- |
| Rv2616/- | (cc=0.3697) | info on Rv2616/- |
| Rv1582c/- | (cc=0.3562) | info on Rv1582c/- |
| Rv0646c/lipG | (cc=0.3512) | info on Rv0646c/lipG |
| Rv2315c/- | (cc=0.3501) | info on Rv2315c/- |
| Rv3695/- | (cc=0.3483) | info on Rv3695/- |
| Rv1861/- | (cc=0.3374) | info on Rv1861/- |
Correlation of Rv1982c/vapC36 with Rv3225c/-
Normalized LFCs for Rv1982c/vapC36:
(description and provenance of datasets)
| Rv1982c/vapC36 | Rv3225c/- | |
| Fe_supp_jason_reseq | 0.532 | 0.046 |
| low_pH_jason_reseq | -1.845 | -0.711 |
| NO_jason_reseq | -0.236 | 0.173 |
| B6_jason_reseq | 0.054 | 0.134 |
| MHCII_jason_reseq | -0.195 | 0.415 |
| Isoniazid02 | 0.017 | 0.271 |
| Rifampicin4 | -0.701 | -0.826 |
| Ethambutol3 | 1.301 | 0.134 |
| Meropenem3 | 0.137 | 0.098 |
| Vancomycin16 | -0.244 | -0.021 |
| Rv2680_day32 | -0.5 | 0.258 |
| H37Rv_KO_MarP | 0.277 | 0.339 |
| hypoxia_3wks | -0.179 | -0.215 |
| hypoxia_6wks | 0.104 | 0.192 |
| glycerol | -0.809 | -0.392 |
| cholesterol | -0.876 | 0.057 |
| AJ | 0.724 | -0.027 |
| Bibs02 | -0.151 | 0.072 |
| Bibs02c | -0.409 | 0.461 |
| BL6 | 0.369 | 0.21 |
| BL6a | -0.181 | -0.265 |
| BXD01 | -0.455 | -0.73 |
| BXD010 | -2.46 | -0.61 |
| BXD011 | -0.817 | -0.859 |
| BXD03 | -0.378 | -0.733 |
| BXD04 | -0.129 | -0.556 |
| BXD05 | -0.065 | -0.729 |
| BXD06 | 0.087 | -0.384 |
| BXD07 | 0.115 | -0.064 |
| BXD08 | -0.564 | -0.598 |
| BXD09 | 0.3 | -0.583 |
| CAST | 0.531 | 0.038 |
| CCcont | -0.365 | -0.229 |
| DS01 | -0.086 | -0.014 |
| DS02 | -0.934 | -0.181 |
| DS04 | 0.427 | 0.87 |
| DS0c | 0.627 | 0.247 |
| GP01 | 0.129 | 1.094 |
| GP02 | 0.883 | 0.869 |
| GP0c | 0.319 | -0.038 |
| NOD | 0.587 | 1.023 |
| NZO | -0.568 | -0.241 |
| PWK | 0.335 | 0.141 |
| H37Rv_KO_CtpC | 1.147 | 0.258 |
| H37Rv_KO_CtpD | -0.421 | -0.237 |
| H37Rv_KO_Rv1272 | -0.366 | -0.481 |
| H37Rv_KO_SugABC | 0.706 | 0.623 |
| H37Rv_KO_MbtN | 0.541 | -0.118 |
| Trans05 | -0.339 | -0.254 |
| macrophage_unactivated | -0.243 | -0.167 |
| IL1 | 0.658 | -0.222 |
| Rapamycin | -0.537 | 0.338 |
| Tcell | -0.655 | -0.499 |
| GMCSF | 0.111 | 0.026 |
| IFNab | 0.314 | -0.16 |
| IFNg | -0.024 | -0.171 |
| IFNg_GMCSF1 | -0.028 | 0.286 |
| Rv1432_day32 | -0.039 | 0.102 |
| Rv1565c_day32 | 0.385 | -0.014 |
| secA2_input | -1.75 | -0.114 |
| delta_Rv3594 | -0.754 | -0.211 |
| delta_Rv3717 | -0.371 | 0.063 |
| delta_Rv3811 | -0.317 | -0.015 |
| delta_Rv0954 | 0.14 | -0.39 |
| PonA1 | -0.541 | 0.624 |
| EccD1_KO | -0.286 | 0.253 |
| EspI_KO | -0.402 | -0.482 |
| PE35_KO | -0.461 | -0.117 |
| PPE68_KO | -0.435 | -0.163 |
| glycerol2 | -0.754 | -0.856 |
| lignocerate | -0.764 | -0.358 |
| oleate | -0.362 | -0.54 |
| phosphatidylcholine | -0.892 | -0.549 |
| acetate | 0.565 | -0.929 |
| glucAc | -0.602 | -0.294 |
| Rv0950ko | -0.443 | 0.238 |
| Rv1096ko | -0.214 | 0.172 |
| Rv3684ko | -0.052 | -0.154 |
| delta_otsA_trehalose | -0.313 | -0.467 |