Top 10 genes with highest correlation to Rv1976c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0933/pstB | (cc=0.4869) | info on Rv0933/pstB |
| Rv0300/vapB2 | (cc=0.4675) | info on Rv0300/vapB2 |
| Rv2854/- | (cc=0.4611) | info on Rv2854/- |
| Rv0387c/- | (cc=0.4535) | info on Rv0387c/- |
| Rv0383c/- | (cc=0.4417) | info on Rv0383c/- |
| Rv1075c/- | (cc=0.4345) | info on Rv1075c/- |
| Rv2831/echA16 | (cc=0.4262) | info on Rv2831/echA16 |
| Rv3086/adhD | (cc=0.4255) | info on Rv3086/adhD |
| Rv1943c/mazE5 | (cc=0.4248) | info on Rv1943c/mazE5 |
| Rv3439c/- | (cc=0.422) | info on Rv3439c/- |
Correlation of Rv1976c/- with Rv2831/echA16
Normalized LFCs for Rv1976c/-:
(description and provenance of datasets)
| Rv1976c/- | Rv2831/echA16 | |
| Fe_supp_jason_reseq | 0.696 | -0.256 |
| low_pH_jason_reseq | 1.633 | 0.639 |
| NO_jason_reseq | -0.564 | -0.116 |
| B6_jason_reseq | 0.857 | 1.588 |
| MHCII_jason_reseq | 1.33 | 1.883 |
| Isoniazid02 | -0.138 | 2.51 |
| Rifampicin4 | -1.148 | 0.601 |
| Ethambutol3 | -0.413 | 2.881 |
| Meropenem3 | 0.086 | 0.048 |
| Vancomycin16 | -0.411 | 0.499 |
| Rv2680_day32 | -2.312 | -3.534 |
| H37Rv_KO_MarP | 0.814 | -0.086 |
| hypoxia_3wks | -0.411 | 0.861 |
| hypoxia_6wks | -0.497 | 0.489 |
| glycerol | -0.24 | 0.205 |
| cholesterol | 0.392 | 1.595 |
| AJ | 1.676 | 0.145 |
| Bibs02 | 0.947 | 0.54 |
| Bibs02c | 0.67 | -0.527 |
| BL6 | 0.186 | -1.548 |
| BL6a | 0.779 | -0.756 |
| BXD01 | -1.329 | -1.326 |
| BXD010 | -0.049 | -1.676 |
| BXD011 | -0.459 | 0.027 |
| BXD03 | -0.351 | -1.77 |
| BXD04 | -0.328 | -1.259 |
| BXD05 | -0.168 | -0.812 |
| BXD06 | -0.223 | -1.436 |
| BXD07 | 0.559 | -0.809 |
| BXD08 | -0.861 | -0.549 |
| BXD09 | 0.324 | -1.143 |
| CAST | 0.649 | -1.39 |
| CCcont | -0.116 | -1.479 |
| DS01 | 1.61 | 0.541 |
| DS02 | 1.224 | 0.859 |
| DS04 | -0.944 | 1.427 |
| DS0c | 0.627 | 0.046 |
| GP01 | -1.305 | 0.531 |
| GP02 | -2.7 | -1.576 |
| GP0c | -1.427 | -0.381 |
| NOD | 0.239 | -0.724 |
| NZO | -0.705 | -1.623 |
| PWK | -0.055 | 0.432 |
| H37Rv_KO_CtpC | -0.211 | -1.522 |
| H37Rv_KO_CtpD | 1.572 | 0.573 |
| H37Rv_KO_Rv1272 | 1.429 | -0.773 |
| H37Rv_KO_SugABC | -1.412 | -1.335 |
| H37Rv_KO_MbtN | -1.964 | -1.826 |
| Trans05 | 0.306 | -2.563 |
| macrophage_unactivated | 0.735 | -0.347 |
| IL1 | 0.569 | 1.385 |
| Rapamycin | 0.516 | 0.064 |
| Tcell | 0.587 | 0.821 |
| GMCSF | 0.428 | -0.055 |
| IFNab | -0.127 | 0.653 |
| IFNg | 0.414 | 0.673 |
| IFNg_GMCSF1 | -0.044 | 0.503 |
| Rv1432_day32 | -1.516 | -0.322 |
| Rv1565c_day32 | 1.387 | 0.924 |
| secA2_input | 0.269 | 0.0 |
| delta_Rv3594 | 2.527 | 1.825 |
| delta_Rv3717 | 2.834 | 1.538 |
| delta_Rv3811 | 1.417 | 2.066 |
| delta_Rv0954 | 2.398 | 2.374 |
| PonA1 | 3.281 | 3.382 |
| EccD1_KO | 0.454 | -1.184 |
| EspI_KO | -1.298 | -0.054 |
| PE35_KO | -0.583 | 0.055 |
| PPE68_KO | -0.704 | -1.389 |
| glycerol2 | 1.065 | -1.345 |
| lignocerate | 0.11 | -1.729 |
| oleate | 0.278 | -0.519 |
| phosphatidylcholine | 0.564 | -1.62 |
| acetate | 0.535 | -2.613 |
| glucAc | 0.488 | -1.71 |
| Rv0950ko | 1.737 | -1.152 |
| Rv1096ko | 1.2 | 0.232 |
| Rv3684ko | 0.265 | -0.848 |
| delta_otsA_trehalose | -2.64 | -0.106 |