Top 10 genes with highest correlation to Rv1976c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0933/pstB | (cc=0.4869) | info on Rv0933/pstB |
| Rv0300/vapB2 | (cc=0.4675) | info on Rv0300/vapB2 |
| Rv2854/- | (cc=0.4611) | info on Rv2854/- |
| Rv0387c/- | (cc=0.4535) | info on Rv0387c/- |
| Rv0383c/- | (cc=0.4417) | info on Rv0383c/- |
| Rv1075c/- | (cc=0.4345) | info on Rv1075c/- |
| Rv2831/echA16 | (cc=0.4262) | info on Rv2831/echA16 |
| Rv3086/adhD | (cc=0.4255) | info on Rv3086/adhD |
| Rv1943c/mazE5 | (cc=0.4248) | info on Rv1943c/mazE5 |
| Rv3439c/- | (cc=0.422) | info on Rv3439c/- |
Correlation of Rv1976c/- with Rv0300/vapB2
Normalized LFCs for Rv1976c/-:
(description and provenance of datasets)
| Rv1976c/- | Rv0300/vapB2 | |
| Fe_supp_jason_reseq | 0.696 | 0.464 |
| low_pH_jason_reseq | 1.633 | -0.924 |
| NO_jason_reseq | -0.564 | -0.305 |
| B6_jason_reseq | 0.857 | 0.449 |
| MHCII_jason_reseq | 1.33 | 0.094 |
| Isoniazid02 | -0.138 | -0.214 |
| Rifampicin4 | -1.148 | -0.16 |
| Ethambutol3 | -0.413 | 0.029 |
| Meropenem3 | 0.086 | 0.422 |
| Vancomycin16 | -0.411 | -0.098 |
| Rv2680_day32 | -2.312 | -0.998 |
| H37Rv_KO_MarP | 0.814 | -0.378 |
| hypoxia_3wks | -0.411 | -0.682 |
| hypoxia_6wks | -0.497 | -0.551 |
| glycerol | -0.24 | 0.553 |
| cholesterol | 0.392 | 0.867 |
| AJ | 1.676 | 0.44 |
| Bibs02 | 0.947 | 0.327 |
| Bibs02c | 0.67 | 0.026 |
| BL6 | 0.186 | -1.319 |
| BL6a | 0.779 | 0.504 |
| BXD01 | -1.329 | -0.518 |
| BXD010 | -0.049 | -0.679 |
| BXD011 | -0.459 | -0.288 |
| BXD03 | -0.351 | -0.188 |
| BXD04 | -0.328 | -0.183 |
| BXD05 | -0.168 | 0.488 |
| BXD06 | -0.223 | -0.314 |
| BXD07 | 0.559 | 0.379 |
| BXD08 | -0.861 | -0.321 |
| BXD09 | 0.324 | -0.228 |
| CAST | 0.649 | 0.904 |
| CCcont | -0.116 | -0.731 |
| DS01 | 1.61 | 0.053 |
| DS02 | 1.224 | 0.884 |
| DS04 | -0.944 | -1.216 |
| DS0c | 0.627 | 0.107 |
| GP01 | -1.305 | -0.693 |
| GP02 | -2.7 | -1.436 |
| GP0c | -1.427 | -0.722 |
| NOD | 0.239 | 0.477 |
| NZO | -0.705 | 0.168 |
| PWK | -0.055 | 0.219 |
| H37Rv_KO_CtpC | -0.211 | 0.0 |
| H37Rv_KO_CtpD | 1.572 | 0.2 |
| H37Rv_KO_Rv1272 | 1.429 | -0.461 |
| H37Rv_KO_SugABC | -1.412 | 0.119 |
| H37Rv_KO_MbtN | -1.964 | -0.46 |
| Trans05 | 0.306 | -0.193 |
| macrophage_unactivated | 0.735 | -0.609 |
| IL1 | 0.569 | 0.451 |
| Rapamycin | 0.516 | 0.479 |
| Tcell | 0.587 | 0.424 |
| GMCSF | 0.428 | 0.227 |
| IFNab | -0.127 | 0.599 |
| IFNg | 0.414 | 0.51 |
| IFNg_GMCSF1 | -0.044 | 0.386 |
| Rv1432_day32 | -1.516 | -0.645 |
| Rv1565c_day32 | 1.387 | 1.42 |
| secA2_input | 0.269 | -0.908 |
| delta_Rv3594 | 2.527 | -0.434 |
| delta_Rv3717 | 2.834 | -0.888 |
| delta_Rv3811 | 1.417 | 0.813 |
| delta_Rv0954 | 2.398 | 0.703 |
| PonA1 | 3.281 | 0.935 |
| EccD1_KO | 0.454 | 0.559 |
| EspI_KO | -1.298 | -0.194 |
| PE35_KO | -0.583 | 0.032 |
| PPE68_KO | -0.704 | -0.278 |
| glycerol2 | 1.065 | -0.189 |
| lignocerate | 0.11 | -0.231 |
| oleate | 0.278 | -0.204 |
| phosphatidylcholine | 0.564 | -0.59 |
| acetate | 0.535 | -1.014 |
| glucAc | 0.488 | -0.841 |
| Rv0950ko | 1.737 | 0.778 |
| Rv1096ko | 1.2 | 0.483 |
| Rv3684ko | 0.265 | -0.183 |
| delta_otsA_trehalose | -2.64 | -1.349 |