Top 10 genes with highest correlation to Rv1971/mce3F:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3072c/- | (cc=0.6028) | info on Rv3072c/- |
| Rv1774/- | (cc=0.577) | info on Rv1774/- |
| Rv1900c/lipJ | (cc=0.5469) | info on Rv1900c/lipJ |
| Rv2622/- | (cc=0.5174) | info on Rv2622/- |
| Rv3447c/eccC4 | (cc=0.494) | info on Rv3447c/eccC4 |
| Rv0570/nrdZ | (cc=0.493) | info on Rv0570/nrdZ |
| Rv2229c/- | (cc=0.4887) | info on Rv2229c/- |
| Rv3586/- | (cc=0.4862) | info on Rv3586/- |
| Rv2577/- | (cc=0.4822) | info on Rv2577/- |
| Rv3703c/- | (cc=0.4785) | info on Rv3703c/- |
Correlation of Rv1971/mce3F with Rv3072c/-
Normalized LFCs for Rv1971/mce3F:
(description and provenance of datasets)
| Rv1971/mce3F | Rv3072c/- | |
| Fe_supp_jason_reseq | 0.387 | 0.183 |
| low_pH_jason_reseq | 0.863 | 0.299 |
| NO_jason_reseq | 0.312 | -0.05 |
| B6_jason_reseq | 0.011 | -0.809 |
| MHCII_jason_reseq | -0.233 | -0.83 |
| Isoniazid02 | -0.569 | -2.282 |
| Rifampicin4 | 0.298 | 0.409 |
| Ethambutol3 | -0.432 | -1.577 |
| Meropenem3 | -1.242 | -0.836 |
| Vancomycin16 | -0.674 | -0.881 |
| Rv2680_day32 | -0.365 | -0.339 |
| H37Rv_KO_MarP | 0.886 | 0.09 |
| hypoxia_3wks | 0.072 | -0.339 |
| hypoxia_6wks | 0.0 | -0.238 |
| glycerol | -0.151 | -0.967 |
| cholesterol | 0.093 | -0.91 |
| AJ | -0.198 | 0.523 |
| Bibs02 | 0.229 | 0.166 |
| Bibs02c | -0.477 | -1.679 |
| BL6 | 0.128 | -0.064 |
| BL6a | -0.271 | -1.29 |
| BXD01 | -0.104 | -0.397 |
| BXD010 | -0.161 | -1.046 |
| BXD011 | -0.54 | -0.715 |
| BXD03 | -0.703 | -1.325 |
| BXD04 | -0.339 | 0.0 |
| BXD05 | -0.433 | -0.355 |
| BXD06 | -0.706 | -0.32 |
| BXD07 | -0.744 | -1.335 |
| BXD08 | -0.616 | -0.169 |
| BXD09 | -0.596 | -0.092 |
| CAST | -0.482 | -0.118 |
| CCcont | -0.399 | -0.189 |
| DS01 | -0.282 | 0.044 |
| DS02 | -0.429 | 0.424 |
| DS04 | -0.394 | 0.242 |
| DS0c | -0.347 | -0.435 |
| GP01 | 0.614 | 0.309 |
| GP02 | 0.728 | 0.5 |
| GP0c | 0.406 | 0.942 |
| NOD | 0.034 | -0.503 |
| NZO | -0.02 | -0.24 |
| PWK | 0.182 | -0.013 |
| H37Rv_KO_CtpC | 0.507 | 0.857 |
| H37Rv_KO_CtpD | 0.198 | 1.134 |
| H37Rv_KO_Rv1272 | 0.125 | -0.704 |
| H37Rv_KO_SugABC | -0.639 | -0.987 |
| H37Rv_KO_MbtN | 0.788 | -0.962 |
| Trans05 | 0.771 | 0.016 |
| macrophage_unactivated | -0.379 | 0.379 |
| IL1 | -0.056 | -1.023 |
| Rapamycin | -0.368 | -0.718 |
| Tcell | -0.257 | -1.365 |
| GMCSF | -0.103 | -0.248 |
| IFNab | -0.762 | -0.828 |
| IFNg | 0.682 | -0.66 |
| IFNg_GMCSF1 | 0.148 | -0.035 |
| Rv1432_day32 | -0.089 | 1.352 |
| Rv1565c_day32 | -0.041 | -0.916 |
| secA2_input | 0.376 | -0.404 |
| delta_Rv3594 | 0.817 | 0.754 |
| delta_Rv3717 | 0.259 | 0.351 |
| delta_Rv3811 | 0.794 | 0.733 |
| delta_Rv0954 | 0.034 | 0.448 |
| PonA1 | -0.428 | 0.648 |
| EccD1_KO | -0.391 | -0.671 |
| EspI_KO | -0.456 | -1.406 |
| PE35_KO | -0.443 | -0.98 |
| PPE68_KO | -0.57 | -0.621 |
| glycerol2 | 0.499 | 0.378 |
| lignocerate | 0.666 | 1.335 |
| oleate | -0.058 | 0.262 |
| phosphatidylcholine | 0.647 | 0.866 |
| acetate | 0.357 | 1.79 |
| glucAc | 0.845 | 1.354 |
| Rv0950ko | 0.793 | 0.751 |
| Rv1096ko | 1.659 | 1.339 |
| Rv3684ko | 1.506 | 1.038 |
| delta_otsA_trehalose | 0.889 | 0.198 |