Top 10 genes with highest correlation to Rv1971/mce3F:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3072c/- | (cc=0.6028) | info on Rv3072c/- |
| Rv1774/- | (cc=0.577) | info on Rv1774/- |
| Rv1900c/lipJ | (cc=0.5469) | info on Rv1900c/lipJ |
| Rv2622/- | (cc=0.5174) | info on Rv2622/- |
| Rv3447c/eccC4 | (cc=0.494) | info on Rv3447c/eccC4 |
| Rv0570/nrdZ | (cc=0.493) | info on Rv0570/nrdZ |
| Rv2229c/- | (cc=0.4887) | info on Rv2229c/- |
| Rv3586/- | (cc=0.4862) | info on Rv3586/- |
| Rv2577/- | (cc=0.4822) | info on Rv2577/- |
| Rv3703c/- | (cc=0.4785) | info on Rv3703c/- |
Correlation of Rv1971/mce3F with Rv2622/-
Normalized LFCs for Rv1971/mce3F:
(description and provenance of datasets)
| Rv1971/mce3F | Rv2622/- | |
| Fe_supp_jason_reseq | 0.387 | -2.369 |
| low_pH_jason_reseq | 0.863 | -0.694 |
| NO_jason_reseq | 0.312 | -0.675 |
| B6_jason_reseq | 0.011 | -0.658 |
| MHCII_jason_reseq | -0.233 | -0.845 |
| Isoniazid02 | -0.569 | -1.765 |
| Rifampicin4 | 0.298 | -0.108 |
| Ethambutol3 | -0.432 | -0.582 |
| Meropenem3 | -1.242 | -1.55 |
| Vancomycin16 | -0.674 | -1.462 |
| Rv2680_day32 | -0.365 | -0.322 |
| H37Rv_KO_MarP | 0.886 | 0.15 |
| hypoxia_3wks | 0.072 | -0.311 |
| hypoxia_6wks | 0.0 | 0.522 |
| glycerol | -0.151 | 0.745 |
| cholesterol | 0.093 | 0.877 |
| AJ | -0.198 | -0.839 |
| Bibs02 | 0.229 | 0.535 |
| Bibs02c | -0.477 | -0.732 |
| BL6 | 0.128 | 1.405 |
| BL6a | -0.271 | -0.716 |
| BXD01 | -0.104 | -1.356 |
| BXD010 | -0.161 | -0.096 |
| BXD011 | -0.54 | 0.117 |
| BXD03 | -0.703 | -0.249 |
| BXD04 | -0.339 | -1.4 |
| BXD05 | -0.433 | -0.614 |
| BXD06 | -0.706 | -1.15 |
| BXD07 | -0.744 | -1.67 |
| BXD08 | -0.616 | -0.089 |
| BXD09 | -0.596 | -0.508 |
| CAST | -0.482 | -0.886 |
| CCcont | -0.399 | -1.206 |
| DS01 | -0.282 | -0.137 |
| DS02 | -0.429 | -1.914 |
| DS04 | -0.394 | -0.909 |
| DS0c | -0.347 | 0.278 |
| GP01 | 0.614 | 0.524 |
| GP02 | 0.728 | 0.02 |
| GP0c | 0.406 | 0.671 |
| NOD | 0.034 | -0.786 |
| NZO | -0.02 | 0.228 |
| PWK | 0.182 | 0.894 |
| H37Rv_KO_CtpC | 0.507 | -0.957 |
| H37Rv_KO_CtpD | 0.198 | 1.241 |
| H37Rv_KO_Rv1272 | 0.125 | 0.231 |
| H37Rv_KO_SugABC | -0.639 | -0.381 |
| H37Rv_KO_MbtN | 0.788 | -0.293 |
| Trans05 | 0.771 | -0.58 |
| macrophage_unactivated | -0.379 | -1.761 |
| IL1 | -0.056 | -1.258 |
| Rapamycin | -0.368 | -0.439 |
| Tcell | -0.257 | -0.616 |
| GMCSF | -0.103 | -2.044 |
| IFNab | -0.762 | -0.082 |
| IFNg | 0.682 | -1.438 |
| IFNg_GMCSF1 | 0.148 | -0.355 |
| Rv1432_day32 | -0.089 | -0.138 |
| Rv1565c_day32 | -0.041 | -0.218 |
| secA2_input | 0.376 | -0.801 |
| delta_Rv3594 | 0.817 | 1.883 |
| delta_Rv3717 | 0.259 | 0.785 |
| delta_Rv3811 | 0.794 | 0.639 |
| delta_Rv0954 | 0.034 | 1.441 |
| PonA1 | -0.428 | 1.277 |
| EccD1_KO | -0.391 | -2.654 |
| EspI_KO | -0.456 | -2.598 |
| PE35_KO | -0.443 | -1.187 |
| PPE68_KO | -0.57 | -1.763 |
| glycerol2 | 0.499 | 0.083 |
| lignocerate | 0.666 | 0.302 |
| oleate | -0.058 | 0.62 |
| phosphatidylcholine | 0.647 | 0.382 |
| acetate | 0.357 | 0.369 |
| glucAc | 0.845 | 0.762 |
| Rv0950ko | 0.793 | 2.05 |
| Rv1096ko | 1.659 | 1.764 |
| Rv3684ko | 1.506 | 0.982 |
| delta_otsA_trehalose | 0.889 | 0.941 |